LOCUS AEE75869.1 641 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pumilio 24 protein.
ACCESSION CP002686-3144
PROTEIN_ID AEE75869.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PUM24"
/locus_tag="AT3G16810"
/gene_synonym="APUM24"
/gene_synonym="pumilio 24"
/inference="Similar to RNA sequence,
EST:INSD:EG494846.1,INSD:BP783175.1,INSD:AV826110.1,
INSD:BP786879.1,INSD:EL028156.1,INSD:BP859829.1,
INSD:EG485134.1,INSD:AI996920.1,INSD:EL136039.1,
INSD:AV547005.1,INSD:EG485133.1,INSD:EL089108.1,
INSD:AA712704.1,INSD:AV793614.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823813.1,INSD:AY045638.1"
/note="pumilio 24 (PUM24); FUNCTIONS IN: RNA binding,
binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pumilio RNA-binding repeat
(InterPro:IPR001313), Armadillo-like helical
(InterPro:IPR011989), Armadillo-type fold
(InterPro:IPR016024); BEST Arabidopsis thaliana protein
match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast
hits to 1306 proteins in 237 species: Archae - 0; Bacteria
- 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses -
0; Other Eukaryotes - 245 (source: NCBI BLink)."
/db_xref="TAIR:AT3G16810"
/db_xref="Araport:AT3G16810"
intron_pos 72:0 (1/16)
intron_pos 90:0 (2/16)
intron_pos 110:2 (3/16)
intron_pos 138:0 (4/16)
intron_pos 179:1 (5/16)
intron_pos 207:1 (6/16)
intron_pos 245:2 (7/16)
intron_pos 296:0 (8/16)
intron_pos 334:0 (9/16)
intron_pos 358:0 (10/16)
intron_pos 375:0 (11/16)
intron_pos 392:0 (12/16)
intron_pos 428:0 (13/16)
intron_pos 491:0 (14/16)
intron_pos 516:0 (15/16)
intron_pos 600:2 (16/16)
BEGIN
1 MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN
61 LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR RNIGKEDRSK LISEAIRKMK
121 GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS
181 KQQLAACISS LRGHVAPLLR HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT
241 SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301 VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA
361 CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL LHPNSSRYLS HDDLAALDLS
421 VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ
481 ELLVNSGLAE RLIDVCVENA EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI
541 SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601 SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E
//