LOCUS AEE75843.1 654 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pentatricopeptide (PPR) repeat-containing
protein protein.
ACCESSION CP002686-3103
PROTEIN_ID AEE75843.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G16610"
/inference="Similar to RNA sequence,
EST:INSD:EL146165.1,INSD:AV540903.1,INSD:AU228706.1,
INSD:Z27296.1,INSD:EH806258.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK229133.1"
/note="pentatricopeptide (PPR) repeat-containing protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT1G11290.1); Has 44074 Blast hits to 13558
proteins in 215 species: Archae - 0; Bacteria - 6; Metazoa
- 87; Fungi - 74; Plants - 43358; Viruses - 0; Other
Eukaryotes - 549 (source: NCBI BLink)."
/db_xref="TAIR:AT3G16610"
/db_xref="Araport:AT3G16610"
BEGIN
1 MFLSLLETCI RSRNLVLGQV IHQHLLKRSL TLSSSTVLVN LTRLYASCNE VELARHVFDE
61 IPHPRINPIA WDLMIRAYAS NDFAEKALDL YYKMLNSGVR PTKYTYPFVL KACAGLRAID
121 DGKLIHSHVN CSDFATDMYV CTALVDFYAK CGELEMAIKV FDEMPKRDMV AWNAMISGFS
181 LHCCLTDVIG LFLDMRRIDG LSPNLSTIVG MFPALGRAGA LREGKAVHGY CTRMGFSNDL
241 VVKTGILDVY AKSKCIIYAR RVFDLDFKKN EVTWSAMIGG YVENEMIKEA GEVFFQMLVN
301 DNVAMVTPVA IGLILMGCAR FGDLSGGRCV HCYAVKAGFI LDLTVQNTII SFYAKYGSLC
361 DAFRQFSEIG LKDVISYNSL ITGCVVNCRP EESFRLFHEM RTSGIRPDIT TLLGVLTACS
421 HLAALGHGSS CHGYCVVHGY AVNTSICNAL MDMYTKCGKL DVAKRVFDTM HKRDIVSWNT
481 MLFGFGIHGL GKEALSLFNS MQETGVNPDE VTLLAILSAC SHSGLVDEGK QLFNSMSRGD
541 FNVIPRIDHY NCMTDLLARA GYLDEAYDFV NKMPFEPDIR VLGTLLSACW TYKNAELGNE
601 VSKKMQSLGE TTESLVLLSN TYSAAERWED AARIRMIQKK RGLLKTPGYS WVDV
//