LOCUS AEE75805.1 537 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana poly(A) binding protein 6 protein.
ACCESSION CP002686-3051
PROTEIN_ID AEE75805.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PAB6"
/locus_tag="AT3G16380"
/gene_synonym="poly(A) binding protein 6"
/gene_synonym="T2O4.4"
/inference="Similar to RNA sequence, EST:INSD:DR355219.1"
/note="poly(A) binding protein 6 (PAB6); CONTAINS InterPro
DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: poly(A) binding protein 2 (TAIR:AT4G34110.1);
Has 47895 Blast hits to 20906 proteins in 826 species:
Archae - 26; Bacteria - 3385; Metazoa - 25529; Fungi -
5704; Plants - 8252; Viruses - 0; Other Eukaryotes - 4999
(source: NCBI BLink)."
/db_xref="TAIR:AT3G16380"
/db_xref="Araport:AT3G16380"
intron_pos 75:1 (1/6)
intron_pos 181:2 (2/6)
intron_pos 268:1 (3/6)
intron_pos 366:1 (4/6)
intron_pos 453:0 (5/6)
intron_pos 474:0 (6/6)
BEGIN
1 MALVKTETQA LGNHQHSSRF GSLYVGDLSP DVTEKDLIDK FSLNVPVVSV HLCRNSVTGK
61 SMCYAYINFD SPFSASNAMT RLNHSDLKGK AMRIMWSQRD LAYRRRTRTG FANLYVKNLD
121 SSITSSCLER MFCPFGSILS CKVVEENGQS KGFGFVQFDT EQSAVSARSA LHGSMVYGKK
181 LFVAKFINKD ERAAMAGNQD STNVYVKNLI ETVTDDCLHT LFSQYGTVSS VVVMRDGMGR
241 SRGFGFVNFC NPENAKKAME SLCGLQLGSK KLFVGKALKK DERREMLKQK FSDNFIAKPN
301 MRWSNLYVKN LSESMNETRL REIFGCYGQI VSAKVMCHEN GRSKGFGFVC FSNCEESKQA
361 KRYLNGFLVD GKPIVVRVAE RKEDRIKRLQ QYFQAQPRQY TQAPSAPSPA QPVLSYVSSS
421 YGCFQPFQVG TSYYYMGNQV PQMSGHQNIT TYVPAGKVPL KERRSMHLVY KHPAYPVAKR
481 GAKQTLVFKG EVNRNLEAAT CSKATTSEEN RKEERRLTLS GKLSPEVKVE ESGKQLQ
//