LOCUS AEE75801.1 387 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002686-3047
PROTEIN_ID AEE75801.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G16350"
/gene_synonym="T2O4.10"
/inference="Similar to RNA sequence,
EST:INSD:DR246728.1,INSD:EL331072.1,INSD:DN604735.1,
INSD:EL026556.1,INSD:AV544419.1,INSD:BP813644.1,
INSD:EG500218.1,INSD:DR246730.1,INSD:DR246729.1,
INSD:AU226271.1,INSD:BP572785.1,INSD:AU235546.1,
INSD:EH984713.1,INSD:BP569406.1,INSD:DR371994.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823088.1,INSD:AY519512.1,INSD:BT005832.1,
INSD:BX823558.1"
/note="Homeodomain-like superfamily protein; CONTAINS
InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding
(InterPro:IPR014778), Zinc finger, CCHC-type
(InterPro:IPR001878), HTH transcriptional regulator,
Myb-type, DNA-binding (InterPro:IPR017930), Myb-like
DNA-binding domain, SHAQKYF class (InterPro:IPR006447);
BEST Arabidopsis thaliana protein match is: myb-like
transcription factor family protein (TAIR:AT5G47390.1);
Has 2847 Blast hits to 2586 proteins in 268 species:
Archae - 0; Bacteria - 117; Metazoa - 791; Fungi - 88;
Plants - 1494; Viruses - 13; Other Eukaryotes - 344
(source: NCBI BLink)."
/db_xref="TAIR:AT3G16350"
/db_xref="Araport:AT3G16350"
intron_pos 136:1 (1/2)
intron_pos 207:0 (2/2)
BEGIN
1 MTRRCSHCSN NGHNSRTCPT RGGGTCGGSG GGGGGGGGGG SGSSSAVKLF GVRLTDGSII
61 KKSASMGNLS ALAVAAAAAT HHRLSPSSPL ATSNLNDSPL SDHARYSNLH HNEGYLSDDP
121 AHGSGSSHRR GERKRGVPWT EEEHRLFLVG LQKLGKGDWR GISRNYVTSR TPTQVASHAQ
181 KYFIRHTSSS RRKRRSSLFD MVTDEMVTDS SPTQEEQTLN GSSPSKEPEK KSYLPSLELS
241 LNNTTEAEEV VATAPRQEKS QEAIEPSNGV SPMLVPGGFF PPCFPVTYTI WLPASLHGTE
301 HALNAETSSQ QHQVLKPKPG FAKERVNMDE LVGMSQLSIG MATRHETETS PSPLSLRLEP
361 SRPSAFHSNG SVNGADLSKG NSAIQAI
//