LOCUS AEE75797.2 728 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-3040
PROTEIN_ID AEE75797.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CDC27a"
/locus_tag="AT3G16320"
/inference="Similar to RNA sequence,
EST:INSD:BX841402.1,INSD:ES006933.1,INSD:T76382.1"
/inference="Similar to RNA sequence,
mRNA:INSD:DQ922637.1,INSD:BX824062.1"
/note="CDC27a; FUNCTIONS IN: binding; INVOLVED IN:
regulation of cell division, cell cycle, gamete
generation, regulation of unidimensional cell growth;
LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: 8 growth stages;
CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1
(InterPro:IPR001440), Tetratricopeptide-like helical
(InterPro:IPR011990), Tetratricopeptide repeat-containing
(InterPro:IPR013026), Tetratricopeptide repeat
(InterPro:IPR019734); BEST Arabidopsis thaliana protein
match is: CDC27 family protein (TAIR:AT2G20000.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT3G16320"
/db_xref="Araport:AT3G16320"
intron_pos 37:0 (1/15)
intron_pos 61:1 (2/15)
intron_pos 98:0 (3/15)
intron_pos 113:2 (4/15)
intron_pos 146:1 (5/15)
intron_pos 243:0 (6/15)
intron_pos 286:0 (7/15)
intron_pos 345:1 (8/15)
intron_pos 416:0 (9/15)
intron_pos 438:0 (10/15)
intron_pos 478:0 (11/15)
intron_pos 503:2 (12/15)
intron_pos 543:2 (13/15)
intron_pos 617:0 (14/15)
intron_pos 711:0 (15/15)
BEGIN
1 MMENLLANCV QKNLNHFMFT NAIFLCELLL AQFPSEVNLQ LLARCYLSNS QAYSAYYILK
61 GSKTPQSRYL FAFSCFKLDL LGEAEAALLP CEDYAEEVPG GAAGHYLLGL IYRYSGRKNC
121 SIQQFRMALS FDPLCWEAYG ELCSLGAAEE ASTVFGNVAS QRLQKTCVEQ RISFSEGATI
181 DQITDSDKAL KDTGLSQTEH IPGENQQDLK IMQQPGDIPP NTDRQLSTNG WDLNTPSPVL
241 LQVMDALPPL LLKNMRRPAV EGSLMSVHGV RVRRRNFFSE ELSAEAQEES GRRRSARIAA
301 RKKNPMSQSF GKDSHWLHLS PSESNYAPSL SSMIGKCRIQ SSKEVIPDTV TLNDPATTSG
361 QSVSDIGSSV DDEEKSNPSE SSPDRFSLIS GISEVLSLLK ILGDGHRHLH MYKCQEALLA
421 YQKLSQKQYN THWVLMQVGK AYFELQDYFN ADSSFTLAHQ KYPYALEGMD TYSTVLYHLK
481 EEMRLGYLAQ ELISVDRLSP ESWCAVGNCY SLRKDHDTAL KMFQRAIQLN ERFTYAHTLC
541 GHEFAALEEF EDAERCYRKA LGIDTRHYNA WYGLGMTYLR QEKFEFAQHQ FQLALQINPR
601 SSVIMCYYGI ALHESKRNDE ALMMMEKAVL TDAKNPLPKY YKAHILTSLG DYHKAQKVLE
661 ELKECAPQES SVHASLGKIY NQLKQYDKAV LHFGIALDLS PSPSDAVKIK AYMERLILPD
721 ELVTEENL
//