LOCUS       AEE75788.1               409 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Putative eukaryotic LigT protein.
ACCESSION   CP002686-3025
PROTEIN_ID  AEE75788.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G16230"
                     /note="Predicted eukaryotic LigT; FUNCTIONS IN: RNA
                     binding, catalytic activity; INVOLVED IN: RNA metabolic
                     process, regulation of transcription; LOCATED IN:
                     mitochondrion; EXPRESSED IN: 22 plant structures;
                     EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
                     DOMAIN/s: K Homology, type 1, subgroup
                     (InterPro:IPR018111), K Homology (InterPro:IPR004087), K
                     Homology, type 1 (InterPro:IPR004088), Predicted
                     eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic
                     nucleotide phosphodiesterase (InterPro:IPR009097), Protein
                     kinase A anchor protein, nuclear localisation signal
                     domain (InterPro:IPR019510); BEST Arabidopsis thaliana
                     protein match is: Predicted eukaryotic LigT
                     (TAIR:AT3G16220.1)."
                     /db_xref="TAIR:AT3G16230"
                     /db_xref="Araport:AT3G16230"
     intron_pos      27:1 (1/11)
     intron_pos      68:0 (2/11)
     intron_pos      80:2 (3/11)
     intron_pos      107:1 (4/11)
     intron_pos      130:0 (5/11)
     intron_pos      223:1 (6/11)
     intron_pos      261:0 (7/11)
     intron_pos      283:0 (8/11)
     intron_pos      313:1 (9/11)
     intron_pos      336:0 (10/11)
     intron_pos      349:2 (11/11)
BEGIN
        1 MDGYKKQKMV NLVWRPISTQ TSSVIAEAGN EVQEVAQCSK SSDVSKEVIE GETASVVSAG
       61 KHSVSLEVGA SLIKFIRGKE GTTQMKLEEE MGVKIILPSS RNKDHISIEG GSVDCVTKAS
      121 KRIATIIDEV VRSPSLDYSH FVSLPLAIHP ELVDKLVNFQ NSILGIHSIA SDKQDDQANR
      181 ATTSVAVDLK ANSETNQVNV GIKSIPIVSY PPKAKSKSST LLDLGIEKSI FIKPSTFHLT
      241 VVMLKLWNKD RVNAACDVLK SIFPSVMDAL DNKPVFIRLK GLDCMRGPLD KTRVLYAPVE
      301 EIGDEGRLLR ACQVITDAFV KAGLVLEKDA KQSLKLHVTV MNARHRKRRK NNKKKMETFD
      361 AREIHKQFGN EDWGEYLIQE AHLSQRFVFD QNGYYRCCGS IPFPGEQRA
//