LOCUS AEE75759.1 930 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Coatomer, beta' subunit protein.
ACCESSION CP002686-2975
PROTEIN_ID AEE75759.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15980"
/note="Coatomer, beta' subunit; FUNCTIONS IN: structural
molecule activity; INVOLVED IN: intracellular protein
transport, vesicle-mediated transport; LOCATED IN:
membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782),
Coatomer, WD associated region (InterPro:IPR006692), WD40
repeat (InterPro:IPR001680), G-protein beta WD-40 repeat,
region (InterPro:IPR020472), WD40 repeat-like-containing
domain (InterPro:IPR011046), Coatomer, beta' subunit
(InterPro:IPR016453), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Coatomer, beta' subunit (TAIR:AT1G52360.1)."
/db_xref="TAIR:AT3G15980"
/db_xref="Araport:AT3G15980"
intron_pos 2:0 (1/23)
intron_pos 9:0 (2/23)
intron_pos 29:2 (3/23)
intron_pos 48:0 (4/23)
intron_pos 60:1 (5/23)
intron_pos 169:0 (6/23)
intron_pos 213:0 (7/23)
intron_pos 262:2 (8/23)
intron_pos 285:2 (9/23)
intron_pos 336:0 (10/23)
intron_pos 364:2 (11/23)
intron_pos 433:0 (12/23)
intron_pos 480:0 (13/23)
intron_pos 505:0 (14/23)
intron_pos 564:0 (15/23)
intron_pos 594:2 (16/23)
intron_pos 633:2 (17/23)
intron_pos 672:0 (18/23)
intron_pos 696:0 (19/23)
intron_pos 761:2 (20/23)
intron_pos 793:0 (21/23)
intron_pos 828:2 (22/23)
intron_pos 872:0 (23/23)
BEGIN
1 MPLRLDIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQTQTIT KSFEVTELPV
61 RSAKFIPRKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD YIRCVAVHPT LPYVLSSSDD
121 MLIKLWDWEN GWACTQIFEG HSHYVMQVVF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT
181 LDAHQKGVNC VDYFTGGDKP YLITGSDDHT AKVWDYQTKS CVQTLDGHTH NVSAVCFHPE
241 LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG
301 REIPVASMDS SGKIIWAKHN EIQTANIKSI GAGYELSSLY LRLLMEKDFP CLLKSWGPVI
361 FIHNYSNSQS LKHNPNGRFV VVCGDGEYII YTALAWRNRS FGSGLEFVWS SEGECAVRES
421 SSKIKIFSKN FQERKSIRPT FSAEKIFGGT LLAMCSNDFI CFYDWAECRL IQQIDVTVKN
481 LYWAESGDLV AIASDTSFYI LKYNRELVSS HFDSGRPTDE EGVEDAFEVL HENDERVRTG
541 IWVGDCFIYN NSSWKLNYCV GGEVTTMYHL DRPMYLLGYI ANQSRVYLVD KEFNVIGYTL
601 LLSLIEYKTL VMRGDLDRAN QILPTIPKEQ HNNVAHFLES RGMIEDALEI ATDPDYKFDL
661 AIQLGRLEIA KEIAEEVQSE SKWKQLGELA MSSGKLQLAE DCMKYAMDLS GLLLLYSSLG
721 DAEGVSKLAC LAKEQGKNNV AFLCLFTLGR LEDCLQLLVE SNRIPEAALM ARSYLPSKVS
781 EIVALWREDL SKVNPKAAES LADPEEYSNL FEDWQVALSV EANTAETRGV YTAAENYPSH
841 ADKPSITLVE AFRNLQVEAE ESLENGNIDH EVAEENGHVE NEGDEEEQQE EEVNEEEGVV
901 DADSTDGAVL VNGSEGEEEW GTNNKGNPSA
//