LOCUS AEE75758.2 918 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Coatomer, beta' subunit protein.
ACCESSION CP002686-2971
PROTEIN_ID AEE75758.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15980"
/note="Coatomer, beta' subunit; FUNCTIONS IN: structural
molecule activity; INVOLVED IN: intracellular protein
transport, vesicle-mediated transport; LOCATED IN:
membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782),
Coatomer, WD associated region (InterPro:IPR006692), WD40
repeat (InterPro:IPR001680), G-protein beta WD-40 repeat,
region (InterPro:IPR020472), WD40 repeat-like-containing
domain (InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), Coatomer, beta' subunit
(InterPro:IPR016453), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Coatomer, beta' subunit (TAIR:AT1G52360.1)."
/db_xref="TAIR:AT3G15980"
/db_xref="Araport:AT3G15980"
intron_pos 2:0 (1/23)
intron_pos 9:0 (2/23)
intron_pos 29:2 (3/23)
intron_pos 48:0 (4/23)
intron_pos 60:1 (5/23)
intron_pos 169:0 (6/23)
intron_pos 213:0 (7/23)
intron_pos 262:2 (8/23)
intron_pos 285:2 (9/23)
intron_pos 336:0 (10/23)
intron_pos 358:0 (11/23)
intron_pos 421:0 (12/23)
intron_pos 468:0 (13/23)
intron_pos 493:0 (14/23)
intron_pos 552:0 (15/23)
intron_pos 582:2 (16/23)
intron_pos 621:2 (17/23)
intron_pos 660:0 (18/23)
intron_pos 684:0 (19/23)
intron_pos 749:2 (20/23)
intron_pos 781:0 (21/23)
intron_pos 816:2 (22/23)
intron_pos 860:0 (23/23)
BEGIN
1 MPLRLDIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQTQTIT KSFEVTELPV
61 RSAKFIPRKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD YIRCVAVHPT LPYVLSSSDD
121 MLIKLWDWEN GWACTQIFEG HSHYVMQVVF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT
181 LDAHQKGVNC VDYFTGGDKP YLITGSDDHT AKVWDYQTKS CVQTLDGHTH NVSAVCFHPE
241 LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG
301 REIPVASMDS SGKIIWAKHN EIQTANIKSI GAGYEATDGE RLPLSVKELG TCDLYPQSLK
361 HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE GECAVRESSS KIKIFSKNFQ
421 ERKSIRPTFS AEKIFGGTLL AMCSNDFICF YDWAECRLIQ QIDVTVKNLY WAESGDLVAI
481 ASDTSFYILK YNRELVSSHF DSGRPTDEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS
541 SWKLNYCVGG EVTTMYHLDR PMYLLGYIAN QSRVYLVDKE FNVIGYTLLL SLIEYKTLVM
601 RGDLDRANQI LPTIPKEQHN NVAHFLESRG MIEDALEIAT DPDYKFDLAI QLGRLEIAKE
661 IAEEVQSESK WKQLGELAMS SGKLQLAEDC MKYAMDLSGL LLLYSSLGDA EGVSKLACLA
721 KEQGKNNVAF LCLFTLGRLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWREDLSK
781 VNPKAAESLA DPEEYSNLFE DWQVALSVEA NTAETRGVYT AAENYPSHAD KPSITLVEAF
841 RNLQVEAEES LENGNIDHEV AEENGHVENE GDEEEQQEEE VNEEEGVVDA DSTDGAVLVN
901 GSEGEEEWGT NNKGNPSA
//