LOCUS AEE75753.1 490 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana mismatched DNA binding / ATP binding
protein protein.
ACCESSION CP002686-2966
PROTEIN_ID AEE75753.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15960"
/note="mismatched DNA binding;ATP binding; FUNCTIONS IN:
mismatched DNA binding, ATP binding; INVOLVED IN: mismatch
repair; LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: DNA mismatch repair protein MutS, connector
(InterPro:IPR007860); BEST Arabidopsis thaliana protein
match is: TSK-associating protein 1 (TAIR:AT1G52410.2);
Has 2921 Blast hits to 2140 proteins in 360 species:
Archae - 16; Bacteria - 619; Metazoa - 982; Fungi - 382;
Plants - 162; Viruses - 5; Other Eukaryotes - 755 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G15960"
/db_xref="Araport:AT3G15960"
intron_pos 26:0 (1/9)
intron_pos 39:1 (2/9)
intron_pos 49:1 (3/9)
intron_pos 86:0 (4/9)
intron_pos 110:1 (5/9)
intron_pos 137:1 (6/9)
intron_pos 153:1 (7/9)
intron_pos 222:1 (8/9)
intron_pos 261:0 (9/9)
BEGIN
1 MGRKYVVLGL AVCLFLSSFN EVSCQAEGGI ESSNSEFQGS FLEEGEVEVT KIESESQSSS
61 SEQNTKLSMS EENQEDSFDV DKFIESEAVS SREELGQSSS MDEVNRDLEA ILDSLNKRDG
121 SDDISKVGES MDAAGIADER RQRLEDIERK LKAAAATNIV VEDGTSKRKS KVEETQEVVK
181 FESESSSASS ESRRQSSSSY NSFNKGTGGS EMLGSLGISQ SGSWRCYNQD KNGVSEEEDT
241 SIVIPKYDID SIIKEESTSQ GSSSKTSSLI ASLTKIVEKH RKEKWSSGVS VSVTKGASST
301 QTSETVEKLK VTLKKYRGLS ARELVARSDF EEILATAARY EELSSASVSH ISRLSMYRSV
361 IKEGIKASQR VQLAYARTRL LKEMAVEKQK NVDAELALVK ALAERGDMLY VKIFAIKKLI
421 SKLEAEKYEV DMTFEKTVAN LSRVIEEASQ AYEEYHVVVR KWKEEQASEE FSREAIERVE
481 MVWVEFLSTL
//