LOCUS AEE75748.1 687 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002686-2958
PROTEIN_ID AEE75748.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15930"
/inference="Similar to RNA sequence,
EST:INSD:EL969091.1,INSD:ES115614.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT2G29760.1); Has 42861 Blast hits to 14596
proteins in 286 species: Archae - 0; Bacteria - 14;
Metazoa - 129; Fungi - 192; Plants - 41743; Viruses - 0;
Other Eukaryotes - 783 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15930"
/db_xref="Araport:AT3G15930"
intron_pos 661:2 (1/1)
BEGIN
1 MILRNPLKSP FNSELSIFKA LLMSTITESI SNDYSRFISI LGVCKTTDQF KQLHSQSITR
61 GVAPNPTFQK KLFVFWCSRL GGHVSYAYKL FVKIPEPDVV VWNNMIKGWS KVDCDGEGVR
121 LYLNMLKEGV TPDSHTFPFL LNGLKRDGGA LACGKKLHCH VVKFGLGSNL YVQNALVKMY
181 SLCGLMDMAR GVFDRRCKED VFSWNLMISG YNRMKEYEES IELLVEMERN LVSPTSVTLL
241 LVLSACSKVK DKDLCKRVHE YVSECKTEPS LRLENALVNA YAACGEMDIA VRIFRSMKAR
301 DVISWTSIVK GYVERGNLKL ARTYFDQMPV RDRISWTIMI DGYLRAGCFN ESLEIFREMQ
361 SAGMIPDEFT MVSVLTACAH LGSLEIGEWI KTYIDKNKIK NDVVVGNALI DMYFKCGCSE
421 KAQKVFHDMD QRDKFTWTAM VVGLANNGQG QEAIKVFFQM QDMSIQPDDI TYLGVLSACN
481 HSGMVDQARK FFAKMRSDHR IEPSLVHYGC MVDMLGRAGL VKEAYEILRK MPMNPNSIVW
541 GALLGASRLH NDEPMAELAA KKILELEPDN GAVYALLCNI YAGCKRWKDL REVRRKIVDV
601 AIKKTPGFSL IEVNGFAHEF VAGDKSHLQS EEIYMKLEEL AQESTFAAYL PDTSELLFEA
661 GDAYSVANRF VRLSGHPGTK NWKSTVR
//