LOCUS AEE75703.1 556 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA photolyase family protein protein.
ACCESSION CP002686-2901
PROTEIN_ID AEE75703.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="UVR3"
/locus_tag="AT3G15620"
/gene_synonym="6-4 PHOTOLYASE"
/gene_synonym="UV REPAIR DEFECTIVE 3"
/inference="Similar to RNA sequence,
EST:INSD:EL294733.1,INSD:EH915415.1,INSD:BP827702.1,
INSD:DR219602.1,INSD:EH849048.1,INSD:BX841039.1,
INSD:EH890271.1"
/inference="Similar to RNA sequence, mRNA:INSD:AB003687.1"
/note="UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro
DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729), DNA photolyase, N-terminal
(InterPro:IPR006050), DNA photolyase,
FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101);
BEST Arabidopsis thaliana protein match is: cryptochrome 2
(TAIR:AT1G04400.1); Has 8860 Blast hits to 8829 proteins
in 1491 species: Archae - 102; Bacteria - 3068; Metazoa -
397; Fungi - 149; Plants - 721; Viruses - 0; Other
Eukaryotes - 4423 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15620"
/db_xref="Araport:AT3G15620"
intron_pos 121:0 (1/13)
intron_pos 145:0 (2/13)
intron_pos 172:0 (3/13)
intron_pos 232:0 (4/13)
intron_pos 256:0 (5/13)
intron_pos 285:0 (6/13)
intron_pos 318:0 (7/13)
intron_pos 346:0 (8/13)
intron_pos 375:0 (9/13)
intron_pos 399:0 (10/13)
intron_pos 437:0 (11/13)
intron_pos 466:1 (12/13)
intron_pos 498:1 (13/13)
BEGIN
1 MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP
61 HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG SRLLVFKGEP GEVLVRCLQE
121 WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY
181 QSFLKVAGEP SCAKSELVMS YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG
241 ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301 YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD
361 GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI HWEQGRDVFE RLLIDSDWAI
421 NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL
481 SVQTKANCIV GKDYPKPMVL HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK
541 DEHEESKIRN QRPKLK
//