LOCUS AEE75698.1 397 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nucleic acid binding protein protein.
ACCESSION CP002686-2898
PROTEIN_ID AEE75698.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15605"
/inference="Similar to RNA sequence,
EST:INSD:EG490220.1,INSD:EG490245.1,INSD:EG492827.1,
INSD:EG490250.1,INSD:EG490246.1,INSD:EL300108.1,
INSD:EG492823.1,INSD:EG490249.1,INSD:EG493861.1,
INSD:DR378713.1,INSD:BP789136.1,INSD:EG490261.1,
INSD:EG490257.1,INSD:EG482789.1,INSD:EG492826.1,
INSD:BP669705.1,INSD:BP598339.1,INSD:AI100476.1,
INSD:EG490219.1,INSD:EG492828.1,INSD:EG482783.1,
INSD:EG490221.1,INSD:AV818853.1,INSD:EG490260.1,
INSD:BP603535.1,INSD:EG490253.1,INSD:EG490232.1,
INSD:BP619695.1,INSD:AV815370.1,INSD:EG490258.1,
INSD:EG490239.1,INSD:EG490264.1,INSD:EG490241.1,
INSD:EG490233.1,INSD:EG490256.1,INSD:EG490242.1,
INSD:EG492825.1,INSD:EG423308.1,INSD:EG490252.1,
INSD:EG490222.1,INSD:BP601143.1"
/inference="Similar to RNA sequence,
mRNA:INSD:DQ492231.1,INSD:DQ653088.1"
/note="nucleic acid binding; FUNCTIONS IN: nucleic acid
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504); BEST Arabidopsis thaliana protein
match is: bromo-adjacent homology (BAH) domain-containing
protein (TAIR:AT5G11470.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15605"
/db_xref="Araport:AT3G15605"
intron_pos 54:1 (1/7)
intron_pos 115:1 (2/7)
intron_pos 209:0 (3/7)
intron_pos 218:0 (4/7)
intron_pos 249:0 (5/7)
intron_pos 275:1 (6/7)
intron_pos 305:2 (7/7)
BEGIN
1 MGKCNVVCTS DDRRNPRPGT KELRRAKYIF SRTFDTRLRI ISEDFADAIA GIGVDKLFNM
61 RRDKQPVKRL NSSAAAITRA SPVKSFRPDL GSTKLGKHDN RDAKLMSRTS SLKKVTFLED
121 RADHVHVKRN PPVNTETTTR GQIPILKTRA FGELYASGSS VNAKPSKKRK LILNTPETDD
181 SDDQGPQSGE KKLIKNPPLV EKAPSQNIEK KSWYKKLPFE DELKPAIEKG RVLLIENLEP
241 SYTSLEVEFL FRQAFKEGVD AKMIPSSPMS SPHSGRALVI FGTTKAADSA MSRLNEDCLM
301 LSGQRALTGS KNVPVEIGRC RSFTGHFNMV DRSLMTAQKV SCCITLRLFS VVISLVMVTH
361 RKPNSPCQIT EYYKLTPLFS LIIVNRPHKF VNFQPHP
//