LOCUS AEE75697.1 399 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nucleic acid binding protein protein.
ACCESSION CP002686-2897
PROTEIN_ID AEE75697.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15605"
/inference="Similar to RNA sequence,
EST:INSD:AV818853.1,INSD:EG490260.1,INSD:BP603535.1,
INSD:EL300108.1,INSD:EG493861.1,INSD:BP619695.1,
INSD:AV815370.1,INSD:DR378713.1,INSD:BP789136.1,
INSD:BP669705.1,INSD:EG492825.1,INSD:EG490259.1,
INSD:BP598339.1,INSD:AI100476.1,INSD:EG490222.1,
INSD:EG490219.1,INSD:BP601143.1"
/inference="Similar to RNA sequence, mRNA:INSD:DQ492230.1"
/note="nucleic acid binding; BEST Arabidopsis thaliana
protein match is: bromo-adjacent homology (BAH)
domain-containing protein (TAIR:AT5G11470.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G15605"
/db_xref="Araport:AT3G15605"
intron_pos 54:1 (1/7)
intron_pos 115:1 (2/7)
intron_pos 209:0 (3/7)
intron_pos 218:0 (4/7)
intron_pos 249:0 (5/7)
intron_pos 277:1 (6/7)
intron_pos 307:2 (7/7)
BEGIN
1 MGKCNVVCTS DDRRNPRPGT KELRRAKYIF SRTFDTRLRI ISEDFADAIA GIGVDKLFNM
61 RRDKQPVKRL NSSAAAITRA SPVKSFRPDL GSTKLGKHDN RDAKLMSRTS SLKKVTFLED
121 RADHVHVKRN PPVNTETTTR GQIPILKTRA FGELYASGSS VNAKPSKKRK LILNTPETDD
181 SDDQGPQSGE KKLIKNPPLV EKAPSQNIEK KSWYKKLPFE DELKPAIEKG RVLLIENLEP
241 SYTSLEVEFL FRQAFKEGVD AKMIPSSPMS SPHSGICRAL VIFGTTKAAD SAMSRLNEDC
301 LMLSGQRALT GSKNVPVEIG RCRSFTGHFN MVDRSLMTAQ KVSCCITLRL FSVVISLVMV
361 THRKPNSPCQ ITEYYKLTPL FSLIIVNRPH KFVNFQPHP
//