LOCUS AEE75696.1 610 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-2894
PROTEIN_ID AEE75696.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15590"
/inference="Similar to RNA sequence,
EST:INSD:EH798572.1,INSD:BP644504.1,INSD:BE525871.1,
INSD:DR288771.1,INSD:ES110498.1,INSD:ES103211.1,
INSD:DR288770.1,INSD:BP606446.1,INSD:EL321949.1,
INSD:EH830632.1,INSD:ES030282.1,INSD:BP568890.1,
INSD:DR378691.1,INSD:AV802472.1,INSD:EH992681.1,
INSD:BP816905.1,INSD:BP807094.1,INSD:EL989511.1,
INSD:ES214138.1,INSD:EH840240.1,INSD:ES005691.1,
INSD:BP672112.1,INSD:BP579781.1,INSD:EH955171.1,
INSD:BP606095.1,INSD:BP614061.1,INSD:BP620088.1,
INSD:DR370517.1,INSD:ES211373.1,INSD:DR288769.1,
INSD:DR303397.1,INSD:BP809794.1,INSD:AV793921.1,
INSD:EH984194.1,INSD:BP869006.1,INSD:EG528020.1,
INSD:BE526864.1,INSD:BP609652.1,INSD:BP788653.1,
INSD:BP786784.1,INSD:ES079712.1,INSD:AV826183.1,
INSD:BP601710.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY102108.1,INSD:BT002636.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: DNA binding; LOCATED IN:
mitochondrion; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
PENTATRICOPEPTIDE REPEAT 596 (TAIR:AT1G80270.3); Has 8565
Blast hits to 4880 proteins in 211 species: Archae - 0;
Bacteria - 30; Metazoa - 169; Fungi - 54; Plants - 8144;
Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15590"
/db_xref="Araport:AT3G15590"
intron_pos 10:2 (1/2)
intron_pos 195:0 (2/2)
BEGIN
1 MYSLSRILQR SQRYNFAPSS FGAVSKLEVS SGGDKERVFK SFGLIYSKPQ GLVRLYSARD
61 VFSRFFGIHK LSSIADAKDK GDEVVREEEL SESEEAVPVS GDVPEGVVDD DSLFEPELGS
121 DNDDLEIEEK HSKDGGKPTK KRGQSELYES IVAYKSVKHV LEKWVKEGKD LSQAEVTLAI
181 HNLRKRKSYA MCLQLWEWLG ANTQFEFTEA NYASQLDLVA KVHSLQKAEI FLKDIPESSR
241 GEVVYRTLLA NCVLKHHVNK AEDIFNKMKE LKFPTSVFAC NQLLLLYSMH DRKKISDVLL
301 LMERENIKPS RATYHFLINS KGLAGDITGM EKIVETIKEE GIELDPELQS ILAKYYIRAG
361 LKERAQDLMK EIEGKGLQQT PWVCRSLLPL YADIGDSDNV RRLSRFVDQN PRYDNCISAI
421 KAWGKLKEVE EAEAVFERLV EKYKIFPMMP YFALMEIYTE NKMLAKGRDL VKRMGNAGIA
481 IGPSTWHALV KLYIKAGEVG KAELILNRAT KDNKMRPMFT TYMAILEEYA KRGDVHNTEK
541 VFMKMKRASY AAQLMQYETV LLAYINAKTP AYGMIERMKA DNVFPNKSLA AKLAQVNPFK
601 KCPVSVLLDI
//