LOCUS AEE75681.1 175 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana fiber (DUF1218) protein.
ACCESSION CP002686-2875
PROTEIN_ID AEE75681.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15480"
/inference="Similar to RNA sequence,
EST:INSD:DR333168.1,INSD:BP647386.1,INSD:AI100558.1,
INSD:BP613867.1,INSD:BP563358.1,INSD:EH920746.1,
INSD:EL212313.1,INSD:AI992899.1,INSD:EH982932.1,
INSD:EH811742.1,INSD:AV440879.1,INSD:DR333158.1,
INSD:ES068162.1,INSD:AV806859.1,INSD:BU635314.1,
INSD:EL133296.1,INSD:BP864207.1,INSD:DR333161.1,
INSD:BP582634.1,INSD:AV442652.1,INSD:BP850971.1,
INSD:EH832834.1,INSD:EH849292.1,INSD:EH883537.1,
INSD:EL324571.1,INSD:EH912433.1,INSD:CB254693.1,
INSD:ES196616.1,INSD:DR353034.1,INSD:EL213882.1,
INSD:BP800211.1,INSD:DR333163.1,INSD:EL309196.1,
INSD:EH801692.1,INSD:DR333165.1,INSD:EH863224.1,
INSD:BP568504.1,INSD:DR322182.1,INSD:EL153754.1,
INSD:ES107637.1,INSD:BP849173.1,INSD:BP567804.1,
INSD:EL161943.1,INSD:EH979715.1,INSD:BP587191.1,
INSD:EL059321.1,INSD:EH924514.1,INSD:DR333167.1,
INSD:BP573612.1,INSD:BP625170.1,INSD:AV829575.1,
INSD:DR333164.1,INSD:BP843644.1,INSD:BP588864.1,
INSD:EH809746.1,INSD:DR333159.1,INSD:DR333166.1,
INSD:EL289418.1,INSD:DR379182.1,INSD:EH962103.1,
INSD:EH881927.1,INSD:EG487035.1,INSD:DR333160.1,
INSD:EL235696.1,INSD:DR333157.1,INSD:ES016469.1,
INSD:DR372906.1,INSD:EL313330.1,INSD:AA067494.1,
INSD:DR373323.1,INSD:EL158517.1,INSD:EG492054.1,
INSD:DR333162.1,INSD:DR373524.1,INSD:ES129465.1,
INSD:DR186385.1,INSD:EL298241.1,INSD:EG492066.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY090318.1,INSD:AY086195.1,INSD:AY057569.1"
/note="Protein of unknown function (DUF1218); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1218 (InterPro:IPR009606); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF1218) (TAIR:AT1G52910.1); Has 522 Blast hits
to 522 proteins in 99 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15480"
/db_xref="Araport:AT3G15480"
intron_pos 31:0 (1/2)
intron_pos 99:2 (2/2)
BEGIN
1 MASKLVVIIV FILDLIAVGL AIAAEQRRSV GKVETDRDKQ YDYCVYGTDI ATSYGAGAFV
61 LLFVSQVLIM AASRCFCCGK SLNPGGSRAC AIILFLICWV FFLIAEMCLL AASIRNAYHT
121 QYRKMWKVED PPSCEVIRKG VFAAGAAFTL FTAIVSQFYY VCYSRARDAY QNPSY
//