LOCUS AEE75660.1 252 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana expansin 12 protein.
ACCESSION CP002686-2848
PROTEIN_ID AEE75660.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EXPA12"
/locus_tag="AT3G15370"
/gene_synonym="ATEXP12"
/gene_synonym="ATEXPA12"
/gene_synonym="ATHEXP ALPHA 1.24"
/gene_synonym="EXP12"
/gene_synonym="expansin 12"
/gene_synonym="EXPANSIN 12"
/inference="Similar to RNA sequence,
EST:INSD:AI995137.1,INSD:H76643.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT011653.1,INSD:BT010937.1"
/note="expansin 12 (EXPA12); INVOLVED IN: plant-type cell
wall organization, unidimensional cell growth, plant-type
cell wall loosening; LOCATED IN: endomembrane system,
extracellular region; EXPRESSED IN: root; CONTAINS
InterPro DOMAIN/s: Barwin-related endoglucanase
(InterPro:IPR009009), Pollen allergen, N-terminal
(InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare
lipoprotein A (InterPro:IPR005132), Expansin/Lol pI
(InterPro:IPR007118), Expansin 45, endoglucanase-like
(InterPro:IPR007112), Pollen allergen/expansin, C-terminal
(InterPro:IPR007117); BEST Arabidopsis thaliana protein
match is: expansin A17 (TAIR:AT4G01630.1); Has 2144 Blast
hits to 2141 proteins in 152 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 40; Plants - 2066; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15370"
/db_xref="Araport:AT3G15370"
intron_pos 45:1 (1/2)
intron_pos 148:2 (2/2)
BEGIN
1 MDMKGTYLVT VILLVSTLSV GMCSNGWIRA HATYYGVNDS PASLGGACGY DNPYHAGFGA
61 HTAALSGELF RSGESCGGCY QVRCDFPADP KWCLRGAAVT VTATNFCPTN NNNGWCNLPR
121 HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS
181 VRSVAVRGSK GKTWLQMTRN WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF
241 GQTFSSRGRQ FV
//