LOCUS AEE75612.1 486 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-2783
PROTEIN_ID AEE75612.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G15070"
/inference="Similar to RNA sequence,
EST:INSD:ES215638.1,INSD:EL075179.1,INSD:EL029009.1,
INSD:BP619525.1,INSD:AV560147.1,INSD:AV563593.1,
INSD:ES008429.1,INSD:ES194640.1,INSD:BP630106.1,
INSD:EL324906.1,INSD:BE528639.1,INSD:EH815283.1,
INSD:BE521921.1,INSD:EL101550.1,INSD:AU230925.1,
INSD:EG520244.1,INSD:BP631196.1,INSD:AI100086.1,
INSD:EG520243.1,INSD:AV783067.1,INSD:BP786337.1,
INSD:BP624011.1,INSD:AV559951.1,INSD:ES081147.1,
INSD:BP613463.1,INSD:BP625015.1,INSD:AI999156.1,
INSD:AV822333.1,INSD:ES175046.1,INSD:AV816697.1,
INSD:BE521922.1,INSD:ES122011.1,INSD:ES181311.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF385699.1,INSD:AY143948.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT1G53190.2); Has 7358 Blast hits to 7345 proteins
in 274 species: Archae - 0; Bacteria - 4; Metazoa - 2154;
Fungi - 590; Plants - 3295; Viruses - 49; Other Eukaryotes
- 1266 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15070"
/db_xref="Araport:AT3G15070"
intron_pos 240:1 (1/4)
intron_pos 348:0 (2/4)
intron_pos 381:0 (3/4)
intron_pos 433:0 (4/4)
BEGIN
1 MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF
61 YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS HGSNDAVVGV TSTEHERNAH
121 FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG
181 AATMDPLLSH GHNNFSQGNY AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG
241 NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301 LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA
361 VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED VKELLKRRTS TRINLEEGPS
421 TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK
481 LRLSSR
//