LOCUS AEE75601.1 395 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cobalt ion binding protein protein.
ACCESSION CP002686-2771
PROTEIN_ID AEE75601.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RIP1"
/locus_tag="AT3G15000"
/gene_synonym="MORF8"
/gene_synonym="multiple organellar RNA editing factor 8"
/gene_synonym="RNA-editing factor interacting protein 1"
/inference="Similar to RNA sequence,
EST:INSD:ES198446.1,INSD:BP652069.1,INSD:AV520479.1,
INSD:ES199603.1,INSD:AV541223.1,INSD:BP588605.1,
INSD:ES034850.1,INSD:BP815270.1,INSD:ES011990.1,
INSD:CF774296.1,INSD:H36297.1,INSD:DR263017.1,
INSD:DR263010.1,INSD:BX837118.1,INSD:DR263015.1,
INSD:ES119996.1,INSD:DR263012.1,INSD:AV538775.1,
INSD:EL243617.1,INSD:T44546.1,INSD:ES125405.1,
INSD:BP640558.1,INSD:ES042425.1,INSD:ES052740.1,
INSD:ES060750.1,INSD:ES108918.1,INSD:EL983563.1,
INSD:BP594075.1,INSD:EH984648.1,INSD:ES142267.1,
INSD:BP787885.1,INSD:BP832747.1,INSD:AV537955.1,
INSD:N97280.1,INSD:AV820268.1,INSD:BE524296.1,
INSD:DR263014.1,INSD:DR343054.1,INSD:Z26387.1,
INSD:AV539491.1,INSD:EL313734.1,INSD:BP632352.1,
INSD:BP778035.1,INSD:AV551511.1,INSD:DR263016.1,
INSD:BE844725.1,INSD:AV551575.1,INSD:T75609.1,
INSD:ES034050.1,INSD:BP641746.1,INSD:AV524667.1,
INSD:DR343053.1,INSD:ES120926.1,INSD:BP671060.1,
INSD:EL999485.1,INSD:EL260376.1,INSD:ES093084.1,
INSD:BP820719.1,INSD:AV551090.1,INSD:ES199279.1,
INSD:AV520484.1,INSD:DR375902.1,INSD:AV531756.1,
INSD:EL082408.1,INSD:DR263013.1,INSD:AA712303.1,
INSD:DR343052.1,INSD:DR343051.1,INSD:BP660803.1,
INSD:BP840446.1,INSD:EH954750.1,INSD:BX834249.1,
INSD:BP615842.1,INSD:AV784958.1,INSD:ES090900.1,
INSD:BP781316.1,INSD:DR263019.1,INSD:BX837432.1,
INSD:DR263020.1,INSD:ES206621.1,INSD:ES202869.1,
INSD:EL213389.1,INSD:EL044438.1,INSD:BP815801.1,
INSD:ES075291.1,INSD:T42919.1,INSD:BP812432.1,
INSD:BP837745.1,INSD:EH963849.1,INSD:BP603645.1,
INSD:AV792886.1,INSD:EL157495.1,INSD:ES033740.1,
INSD:AV812279.1,INSD:EH877835.1,INSD:EL273629.1,
INSD:BP857566.1,INSD:EL242007.1,INSD:BP586618.1,
INSD:AV789299.1,INSD:ES216109.1,INSD:BP858382.1,
INSD:EL982883.1,INSD:EL035521.1,INSD:CF652671.1,
INSD:BP820373.1,INSD:BP604771.1,INSD:BP840623.1,
INSD:BP797566.1,INSD:AV550482.1,INSD:DR263021.1,
INSD:EH868525.1,INSD:BP638848.1,INSD:BP818991.1,
INSD:AV541468.1,INSD:BP825791.1,INSD:DR263011.1,
INSD:ES184885.1,INSD:DR263009.1,INSD:DR263023.1,
INSD:BP813287.1,INSD:AV791921.1,INSD:AV814890.1,
INSD:EL276790.1,INSD:EH903289.1,INSD:BP844376.1,
INSD:AV533956.1,INSD:ES147089.1,INSD:EL229725.1,
INSD:AV550507.1,INSD:AV518518.1,INSD:EH901536.1,
INSD:AV526492.1,INSD:ES188675.1,INSD:BE527155.1,
INSD:ES214995.1,INSD:BP569574.1,INSD:AV530368.1,
INSD:ES156109.1,INSD:ES140426.1,INSD:BP854311.1,
INSD:ES066469.1,INSD:ES176998.1,INSD:AV823882.1,
INSD:AV803650.1,INSD:ES054239.1,INSD:ES142146.1,
INSD:AV534623.1,INSD:BP602383.1,INSD:BP829151.1,
INSD:DR263022.1,INSD:ES141247.1,INSD:ES044391.1,
INSD:BP656712.1,INSD:BP636745.1,INSD:ES198872.1,
INSD:ES152039.1,INSD:ES109258.1,INSD:BP861420.1,
INSD:AV790810.1,INSD:DR263026.1,INSD:BP575501.1,
INSD:BP812715.1,INSD:BP644947.1,INSD:ES003621.1,
INSD:BX834403.1,INSD:EL022056.1,INSD:BP777532.1,
INSD:DR263025.1,INSD:BP570943.1,INSD:EL256119.1,
INSD:DR263024.1,INSD:AV565859.1,INSD:ES009659.1,
INSD:ES208941.1,INSD:BP806037.1,INSD:AV530310.1,
INSD:ES111478.1,INSD:EL974559.1,INSD:EL091748.1,
INSD:ES204279.1,INSD:EH970025.1,INSD:BP655490.1,
INSD:ES044487.1,INSD:ES118037.1,INSD:ES065156.1,
INSD:ES197438.1,INSD:ES042812.1,INSD:ES142685.1,
INSD:Z25581.1,INSD:AV525734.1,INSD:BE528807.1,
INSD:BP832709.1,INSD:ES079932.1,INSD:BP813240.1,
INSD:H37475.1,INSD:ES047189.1,INSD:BX837266.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF428427.1,INSD:BX823328.1,INSD:BT015868.1,
INSD:AK226420.1"
/note="cobalt ion binding; FUNCTIONS IN: cobalt ion
binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: plastid
developmental protein DAG, putative (TAIR:AT3G06790.2);
Has 57621 Blast hits to 29750 proteins in 1231 species:
Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi -
8402; Plants - 8184; Viruses - 944; Other Eukaryotes -
5969 (source: NCBI BLink)."
/db_xref="TAIR:AT3G15000"
/db_xref="Araport:AT3G15000"
intron_pos 130:2 (1/3)
intron_pos 163:1 (2/3)
intron_pos 185:1 (3/3)
BEGIN
1 MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV
61 SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW LVVVEPPQGE PTRDEIIDSY
121 IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN
181 KDYGGEPFID GKAVPYDPKY HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG
241 PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301 PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP
361 PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
//