LOCUS AEE75577.1 492 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NHL domain-containing protein protein.
ACCESSION CP002686-2739
PROTEIN_ID AEE75577.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G14860"
/inference="Similar to RNA sequence,
EST:INSD:AV790220.1,INSD:BP593481.1,INSD:BP664339.1,
INSD:BP578694.1,INSD:EL011256.1,INSD:DR297304.1,
INSD:EL288405.1,INSD:EL062624.1,INSD:BP667131.1,
INSD:ES063128.1,INSD:BP574711.1,INSD:BP567736.1,
INSD:BX835777.1,INSD:BE844785.1,INSD:BP575028.1,
INSD:BP568562.1,INSD:BP579870.1,INSD:ES127958.1,
INSD:BP577501.1,INSD:BP603700.1,INSD:ES075309.1,
INSD:EL269074.1,INSD:DR380502.1,INSD:EH948513.1,
INSD:BP803658.1,INSD:EL251621.1,INSD:DR297303.1,
INSD:BP621178.1,INSD:EL092592.1,INSD:BP590940.1,
INSD:BP608857.1,INSD:ES092772.1,INSD:BP664375.1,
INSD:BP561390.1,INSD:BP861863.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY093056.1,INSD:BT002079.1"
/note="NHL domain-containing protein; CONTAINS InterPro
DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed
beta-propeller, TolB-like (InterPro:IPR011042); BEST
Arabidopsis thaliana protein match is: NHL
domain-containing protein (TAIR:AT1G70280.2); Has 2752
Blast hits to 1249 proteins in 210 species: Archae - 76;
Bacteria - 1297; Metazoa - 50; Fungi - 0; Plants - 213;
Viruses - 0; Other Eukaryotes - 1116 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G14860"
/db_xref="Araport:AT3G14860"
intron_pos 43:1 (1/6)
intron_pos 67:1 (2/6)
intron_pos 123:1 (3/6)
intron_pos 180:1 (4/6)
intron_pos 251:1 (5/6)
intron_pos 281:0 (6/6)
BEGIN
1 MGKSQILLNA ESFTCSSFNT FFTLWIFFTL HSFPFQAQAA PSGSLIKHMS SVLKWTTGSS
61 SKLSQSDTNV LQFENGYLVE TVVEGNDIGV VPYKIRVSDD GELYAVDELN SNIMKITPPL
121 SQYSRGRLVA GSFQGKTGHA DGKPSEARFN HPRGVTMDDK GNVYVADTLN LAIRKIGDSG
181 VTTIAGGKSN IAGYRDGPSE DAKFSNDFDV VYVRPTCSLL VIDRGNAALR QISLSEEDCD
241 YQDDSSISLT DILLVIGAVL IGYATCMLQQ GFGNSFFSKT VGSETSYEEE HPGKEKLSRP
301 VHEKTITKEE PGWPSFGQLL TDLCKLALEF ITSHLVPARF QTNPNLRPLK DRLIMPEDEQ
361 EPPRVQRHTA PAPISESRHA HLPKADDSYP EHKTPKLRSS SVMKDPTLSS SKHHRTSSKR
421 QDYAQFYASG EVAQPKIHKE RSRRRHRDKT TETEPKPTPS DTVKPVEYSN SSKFDHYNMR
481 SSKYGPETPF RF
//