LOCUS AEE75475.1 363 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Aldolase-type TIM barrel family protein
protein.
ACCESSION CP002686-2602
PROTEIN_ID AEE75475.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HAOX1"
/locus_tag="AT3G14130"
/inference="Similar to RNA sequence,
EST:INSD:DR275614.1,INSD:EL983165.1,INSD:EH893864.1,
INSD:DR378645.1,INSD:ES030781.1,INSD:ES026478.1,
INSD:ES026157.1,INSD:BP617334.1,INSD:BP611699.1,
INSD:AV800833.1,INSD:ES173905.1,INSD:DR380548.1,
INSD:DR275611.1,INSD:BP655088.1,INSD:ES093625.1,
INSD:DR275612.1,INSD:ES014437.1,INSD:DR275613.1,
INSD:BE528298.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823435.1,INSD:AY085037.1,INSD:AY072169.1,
INSD:BT002739.1"
/note="Aldolase-type TIM barrel family protein; FUNCTIONS
IN: glycolate oxidase activity, oxidoreductase activity,
FMN binding, catalytic activity; INVOLVED IN: oxidation
reduction, metabolic process; CONTAINS InterPro DOMAIN/s:
Aldolase-type TIM barrel (InterPro:IPR013785),
FMN-dependent alpha-hydroxy acid dehydrogenase, active
site (InterPro:IPR008259), FMN-dependent dehydrogenase
(InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase,
FMN-dependent (InterPro:IPR012133); BEST Arabidopsis
thaliana protein match is: Aldolase-type TIM barrel family
protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056
proteins in 2002 species: Archae - 228; Bacteria - 6055;
Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0;
Other Eukaryotes - 5300 (source: NCBI BLink)."
/db_xref="TAIR:AT3G14130"
/db_xref="Araport:AT3G14130"
intron_pos 47:2 (1/10)
intron_pos 89:1 (2/10)
intron_pos 105:0 (3/10)
intron_pos 131:0 (4/10)
intron_pos 172:2 (5/10)
intron_pos 192:0 (6/10)
intron_pos 213:0 (7/10)
intron_pos 236:1 (8/10)
intron_pos 270:0 (9/10)
intron_pos 305:0 (10/10)
BEGIN
1 MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID
61 MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC NTIMIVSFMS TCTIEEVASS
121 CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN
181 FEGLVSTEVR PNEGSGVEAF ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV
241 EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301 QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK
361 SML
//