LOCUS AEE75472.1 1101 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear pore complex protein protein.
ACCESSION CP002686-2599
PROTEIN_ID AEE75472.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G14120"
/inference="Similar to RNA sequence,
EST:INSD:ES127800.1,INSD:BP617334.1,INSD:ES096060.1,
INSD:BP611699.1,INSD:BP804948.1,INSD:ES032784.1,
INSD:ES097757.1,INSD:AV554915.1,INSD:BP610758.1,
INSD:ES075317.1,INSD:AV824072.1,INSD:BE528191.1,
INSD:ES136471.1,INSD:ES108317.1,INSD:ES100245.1,
INSD:BP804773.1,INSD:EL112756.1,INSD:EL230388.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825101.1,INSD:AY139761.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink)."
/db_xref="TAIR:AT3G14120"
/db_xref="Araport:AT3G14120"
intron_pos 27:2 (1/23)
intron_pos 146:1 (2/23)
intron_pos 169:2 (3/23)
intron_pos 208:1 (4/23)
intron_pos 219:0 (5/23)
intron_pos 261:0 (6/23)
intron_pos 314:0 (7/23)
intron_pos 345:0 (8/23)
intron_pos 401:0 (9/23)
intron_pos 434:0 (10/23)
intron_pos 509:2 (11/23)
intron_pos 529:0 (12/23)
intron_pos 558:2 (13/23)
intron_pos 602:2 (14/23)
intron_pos 643:2 (15/23)
intron_pos 676:2 (16/23)
intron_pos 739:2 (17/23)
intron_pos 797:0 (18/23)
intron_pos 847:1 (19/23)
intron_pos 915:0 (20/23)
intron_pos 986:1 (21/23)
intron_pos 1040:0 (22/23)
intron_pos 1079:0 (23/23)
BEGIN
1 MDMDMDTSPS YFDPEALSVR DQFRRYRKRH STSPHEEMLS SNVSENRLLY DGHNIHSPTN
61 TALLLENIKE EVDNFHTDHY EGTPTNPISA SRRESVGILN DDDEALFRRV ESQSLKACKI
121 ENDELAESGD TTFALFASLF DSALQGLMSI PNLMLRLEES CRNVSQSIRY GSDIRHRAVE
181 DKLMRQKAQL LLGEAASWSL LWNLYGKGTD EVPENLILIP STSHLEACQF VLNDHTAQLC
241 LRIVMWLEEL ASKSLDLERK VQGSHVGTYL PNAGVWHHTQ RYLKKNGSNA DTLHHLDFDA
301 PTREHARLLP DDYKQDESVL EDVWTLIRAG RIEEACDLCR SAGQSWRAAT LCPFSGMDMF
361 PSIEALVKNG ENRTLQAIEQ ESGFGNQLRL WKWASYCASE KIAEQDGGKH EVAVFATQCS
421 NLNRMLPICT DWESACWAMA KSWLDVQVDL ELAQSKPGLT ERFKSCIDES PEATQNGCQA
481 SFGPEDWPLH VLNQQPRDLP ALLQKLHSGE MVHEAVVRGC KEQHRQIQMN LMLGDISHLL
541 DIIWSWIAPL EDDQSNFRPH GDPHMIKFGA HMVLVLRLLF TDEINDSFKE KLNNVGDLIL
601 HMYAMFLFSK QHEELVGIYA SQLARHRCIE LFVHMMELRM HSSVHVKYKI FLSAMEYLSF
661 SPVDDLHGNF EEIVDRVLSR SREIKLAKYD PSIDVAEQHR QQSLQKAIAI QWLCFTPPST
721 IKDVKDVTSK LLLRSLMHSN ILFREFALIA MWRVPATPVG AHTLLSYLAE PLKQLSENPD
781 TLEDYVSENL QEFQDWNEYY SCDAKYRNWL KFQLENAEVT ELSEEENQKA VVAAKETLDS
841 SLSLLLRQDN PWMTFLEDHV FESEEYLFLE LHATAMLCLP SGECLRPDAT VCAALMSALY
901 SSVSEEVVLD RQLMVNVSIS SRDSYCIEVV LRCLAIKGDG LGPHNANDGG ILSAVAAAGF
961 KGSDIYGTYF SFTYDLPPFS IEIWGCELTR FQAGVTMDIS RLDAWYSSKE GSLETPATYI
1021 VRGLCRRCCL PELVLRSMQV SVSLMESGNP PEDHDELIEL VASDETGFLS LFSRQQLQEF
1081 MLFEREYRMS QLELQEELSS P
//