LOCUS AEE75440.1 402 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana eukaryotic translation initiation
factor 4A1 protein.
ACCESSION CP002686-2559
PROTEIN_ID AEE75440.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EIF4A1"
/locus_tag="AT3G13920"
/gene_synonym="eukaryotic translation initiation factor
4A1"
/gene_synonym="RH4"
/gene_synonym="TIF4A1"
/inference="Similar to RNA sequence,
EST:INSD:EL127248.1,INSD:BP779359.1,INSD:DR265163.1,
INSD:BP607605.1,INSD:AV563068.1,INSD:BP616942.1,
INSD:AV543612.1,INSD:EL970023.1,INSD:BP586124.1,
INSD:AV540216.1,INSD:EL004110.1,INSD:BP590349.1,
INSD:ES009386.1,INSD:BP603520.1,INSD:CB260999.1,
INSD:BP598978.1,INSD:EH907698.1,INSD:ES152212.1,
INSD:DR374689.1,INSD:BP650943.1,INSD:DR279057.1,
INSD:EH921496.1,INSD:EH923984.1,INSD:DR330755.1,
INSD:AV547492.1,INSD:BP628815.1,INSD:BP611641.1,
INSD:AV788233.1,INSD:BE520930.1,INSD:BP782721.1,
INSD:AV538514.1,INSD:EL050321.1,INSD:BP614719.1,
INSD:BP588365.1,INSD:BP574355.1,INSD:T13729.1,
INSD:BP590457.1,INSD:EL081145.1,INSD:BP657401.1,
INSD:AV793527.1,INSD:BP628575.1,INSD:CB256278.1,
INSD:EH967793.1,INSD:EL339698.1,INSD:ES131260.1,
INSD:BP576987.1,INSD:EH950044.1,INSD:ES141444.1,
INSD:BP654477.1,INSD:EG430983.1,INSD:BP583449.1,
INSD:EL969605.1,INSD:BP629407.1,INSD:EH934204.1,
INSD:BP599651.1,INSD:ES193937.1,INSD:AV566621.1,
INSD:AV566695.1,INSD:H36588.1,INSD:BP666580.1,
INSD:BP661378.1,INSD:BP594479.1,INSD:BP584719.1,
INSD:BP631255.1,INSD:DR330822.1,INSD:AV540950.1,
INSD:CF651366.1,INSD:BP629743.1,INSD:CB256275.1,
INSD:BP794647.1,INSD:H36217.1,INSD:EL121033.1,
INSD:CB261909.1,INSD:ES087176.1,INSD:AV807039.1,
INSD:EH821745.1,INSD:BP593623.1,INSD:AV560340.1,
INSD:AV561548.1,INSD:AV543540.1,INSD:EH897451.1,
INSD:ES138245.1,INSD:AV562888.1,INSD:BP778313.1,
INSD:AV519739.1,INSD:EH801030.1,INSD:AV552871.1,
INSD:BP658063.1,INSD:BP612416.1,INSD:BP847865.1,
INSD:AV566351.1,INSD:BP601112.1,INSD:BP596522.1,
INSD:BP604760.1,INSD:AV543276.1,INSD:DR265167.1,
INSD:DR374467.1,INSD:DR330882.1,INSD:BP791112.1,
INSD:BP660138.1,INSD:DR259055.1,INSD:BP607560.1,
INSD:EL093415.1,INSD:DR378772.1,INSD:DR330890.1,
INSD:BP639720.1,INSD:AV520369.1,INSD:BP574055.1,
INSD:AV820319.1,INSD:BP635023.1,INSD:AV566774.1,
INSD:EH945935.1,INSD:AV542492.1,INSD:ES075600.1,
INSD:AV802960.1,INSD:BP666335.1,INSD:BP788916.1,
INSD:H37383.1,INSD:BP633718.1,INSD:AV563634.1,
INSD:AV785541.1,INSD:EL298280.1,INSD:BP630191.1,
INSD:BP617315.1,INSD:DR330860.1,INSD:EH814953.1,
INSD:BP660419.1,INSD:BP587891.1,INSD:EG504508.1,
INSD:BP591094.1,INSD:BP587396.1,INSD:DR330797.1,
INSD:BP596139.1,INSD:BP618434.1,INSD:EL996449.1,
INSD:T13951.1,INSD:AV786928.1,INSD:ES213333.1,
INSD:BP591332.1,INSD:BP591505.1,INSD:AV565928.1,
INSD:BU635986.1,INSD:BP581618.1,INSD:BP592337.1,
INSD:AV795738.1,INSD:EL145100.1,INSD:AV567682.1,
INSD:EL289865.1,INSD:AV530668.1,INSD:W43218.1,
INSD:BP575480.1,INSD:EH848656.1,INSD:AV539983.1,
INSD:BP790242.1,INSD:AB038717.1,INSD:AV524584.1,
INSD:AV537890.1,INSD:EL165753.1,INSD:EL118537.1,
INSD:DR330811.1,INSD:BP816362.1,INSD:AV792123.1,
INSD:BP612692.1,INSD:EL260166.1,INSD:AV800767.1,
INSD:EL178284.1,INSD:AV564628.1,INSD:AV563897.1,
INSD:AV539369.1,INSD:AV559379.1,INSD:DR330846.1,
INSD:BP608364.1,INSD:BP600281.1,INSD:DR330616.1,
INSD:BP788066.1,INSD:EH833276.1,INSD:EH807939.1,
INSD:BP588008.1,INSD:ES067092.1,INSD:BP566257.1,
INSD:BP631603.1,INSD:AV440049.2,INSD:AV559807.1,
INSD:AV566458.1,INSD:BP606469.1,INSD:ES038461.1,
INSD:BP588651.1,INSD:AV562468.1,INSD:EL055018.1,
INSD:AV787664.1,INSD:AV549264.1,INSD:AV536888.1,
INSD:EL037430.1,INSD:CA781323.1,INSD:BP638332.1,
INSD:EL285896.1,INSD:AV567139.1,INSD:BP792337.1,
INSD:ES008247.1,INSD:EH979617.1,INSD:ES172732.1,
INSD:ES074108.1,INSD:AV563831.1,INSD:BE522465.1,
INSD:BP613794.1,INSD:ES047005.1,INSD:BP667146.1,
INSD:BP615527.1,INSD:EH852951.1,INSD:EH943845.1,
INSD:BP648162.1,INSD:BP654608.1,INSD:AV522334.1,
INSD:BP666136.1,INSD:BP593650.1,INSD:AV802126.1,
INSD:AV567138.1,INSD:AV530884.1,INSD:EL202403.1,
INSD:BP670395.1,INSD:DR330667.1,INSD:EG478841.1,
INSD:BP786577.1,INSD:BP585621.1,INSD:ES063864.1,
INSD:CF651367.1,INSD:EL014415.1,INSD:EL333942.1,
INSD:BP568093.1,INSD:EL187505.1,INSD:AV567273.1,
INSD:AV543031.1,INSD:EH799330.1,INSD:BP599246.1,
INSD:EH826968.1,INSD:BP782590.1,INSD:BP598736.1,
INSD:BP639497.1,INSD:EH900342.1,INSD:BP619213.1,
INSD:AV560245.1,INSD:ES110450.1,INSD:EL100359.1,
INSD:BP583230.1,INSD:BP658986.1,INSD:DR262765.1,
INSD:BE520931.1,INSD:BP598536.1,INSD:BP671780.1,
INSD:BP632169.1,INSD:AV562694.1,INSD:ES153605.1,
INSD:BP641152.1,INSD:BP574370.1,INSD:DR330891.1,
INSD:EL983712.1,INSD:EL094275.1,INSD:EH886664.1,
INSD:AV801560.1,INSD:T21865.1,INSD:AV796888.1,
INSD:BE520712.1,INSD:EL218148.1,INSD:AV556037.1,
INSD:AV518436.1,INSD:ES136815.1,INSD:BP656903.1,
INSD:BP564117.1,INSD:AV543033.1,INSD:EL203738.1,
INSD:BP610636.1,INSD:AV543124.1,INSD:DR317019.1,
INSD:BP632206.1,INSD:DR330823.1,INSD:ES113849.1,
INSD:BP650926.1,INSD:BP659589.1,INSD:AV544440.1,
INSD:BP601749.1,INSD:BP582105.1,INSD:AV559256.1,
INSD:EL316329.1,INSD:EL982843.1,INSD:AV560819.1,
INSD:BP784358.1,INSD:ES072516.1,INSD:AV791455.1,
INSD:BP653192.1,INSD:EG513701.1,INSD:AV562911.1,
INSD:DR330673.1,INSD:BP638372.1,INSD:AV819537.1,
INSD:AV538770.1,INSD:DR330619.1,INSD:DR265166.1,
INSD:AV563702.1,INSD:BP603606.1,INSD:AV551084.1,
INSD:BP663599.1,INSD:AV790769.1,INSD:AV562703.1,
INSD:AV784850.1,INSD:BE520188.1,INSD:BP650678.1,
INSD:AV535798.1,INSD:ES177456.1,INSD:EL976620.1,
INSD:BP568303.1,INSD:BP591587.1,INSD:BP813133.1,
INSD:AV798173.1,INSD:BP608945.1,INSD:AV538844.1,
INSD:ES109268.1,INSD:BP618090.1,INSD:CB256276.1,
INSD:AV566747.1,INSD:BP566780.1,INSD:BP615196.1,
INSD:BP576339.1,INSD:AV519855.1,INSD:EL104989.1,
INSD:EH977585.1,INSD:ES142227.1,INSD:AV531237.1,
INSD:EL171663.1,INSD:AV565449.1,INSD:EH942569.1,
INSD:BP563170.1,INSD:DR330868.1,INSD:N65129.1,
INSD:CB261987.1,INSD:BP634693.1,INSD:BP599218.1,
INSD:DR330753.1,INSD:BP618718.1,INSD:BP639101.1,
INSD:EL276918.1,INSD:EL245741.1,INSD:AV792204.1,
INSD:EH928605.1,INSD:BP564803.1,INSD:AV796820.1,
INSD:AV533799.1,INSD:BP640463.1,INSD:AV541564.1,
INSD:EG444273.1,INSD:CB185659.1,INSD:BP597726.1,
INSD:EG430984.1,INSD:AV550802.1,INSD:BP629971.1,
INSD:BP591739.1,INSD:BP613054.1,INSD:EL269708.1,
INSD:BP612069.1,INSD:ES033209.1,INSD:AV792196.1,
INSD:BP565547.1,INSD:AV535259.1,INSD:BP612415.1,
INSD:ES185890.1,INSD:CB256277.1,INSD:EH906627.1,
INSD:BP622338.1,INSD:BP633328.1,INSD:ES024313.1,
INSD:BP785312.1,INSD:BP658169.1,INSD:EL108913.1,
INSD:AV565038.1,INSD:BP564309.1,INSD:AV791720.1,
INSD:ES138882.1,INSD:BP813449.1,INSD:AV533172.1,
INSD:BP651168.1,INSD:AV787109.1,INSD:AV519923.1,
INSD:AV532654.1,INSD:AV792055.1,INSD:BP611819.1,
INSD:BP654362.1,INSD:AV517994.1,INSD:EL305544.1,
INSD:Z17937.1,INSD:EL983952.1,INSD:AV546791.1,
INSD:AV522356.1,INSD:AV543635.1,INSD:BP564947.1,
INSD:AV562356.1,INSD:DR330859.1,INSD:EL240550.1,
INSD:BP661525.1,INSD:BP787192.1,INSD:BP606890.1,
INSD:AV563948.1,INSD:BP601744.1,INSD:AW004346.1,
INSD:BP591346.1,INSD:BP572835.1,INSD:CB262270.1,
INSD:EH940161.1,INSD:BP823414.1,INSD:BP600236.1,
INSD:AV532462.1,INSD:BP574366.1,INSD:BP593907.1,
INSD:BP563523.1,INSD:DR330863.1,INSD:EL228222.1,
INSD:BP644468.1,INSD:ES135568.1,INSD:DR330905.1,
INSD:EL050612.1,INSD:ES048160.1,INSD:T22119.1,
INSD:BP654780.1,INSD:BP566534.1,INSD:ES154135.1,
INSD:ES021740.1,INSD:BP670284.1,INSD:CK121147.1,
INSD:EL335779.1,INSD:EH821535.1,INSD:BP631832.1,
INSD:EH919737.1,INSD:AV526025.1,INSD:BP589508.1,
INSD:AV546500.1,INSD:BP614745.1,INSD:AV542502.1,
INSD:EL984450.1,INSD:BP791699.1,INSD:DR330769.1,
INSD:BP600630.1,INSD:BP605367.1,INSD:BE521598.1,
INSD:BP791296.1,INSD:ES204964.1,INSD:AV562471.1,
INSD:AV552574.1,INSD:EL326401.1,INSD:EH842569.1,
INSD:ES103915.1,INSD:AV521429.1,INSD:AV526626.1,
INSD:AV538490.1,INSD:BP630165.1,INSD:DR330632.1,
INSD:AV800698.1,INSD:EL986746.1,INSD:BP645054.1,
INSD:AV538953.1,INSD:BP598550.1,INSD:EL001255.1,
INSD:BP625300.1,INSD:AV531218.1,INSD:BP657196.1,
INSD:BP652693.1,INSD:ES164192.1,INSD:AV806467.1,
INSD:AV539383.1,INSD:AV532844.1,INSD:ES082129.1,
INSD:ES042781.1,INSD:N65884.1,INSD:BP653305.1,
INSD:AV543569.1,INSD:EG445994.1,INSD:AV551175.1,
INSD:CB264385.1,INSD:BP811976.1,INSD:ES109262.1,
INSD:EH888103.1,INSD:BP577877.1,INSD:BP794344.1,
INSD:BP607144.1,INSD:BP621951.1,INSD:BP662323.1,
INSD:AV561999.1,INSD:BP836418.1,INSD:ES187372.1,
INSD:ES058493.1,INSD:BP566897.1,INSD:BE524821.1,
INSD:AV532753.1,INSD:AV539489.1,INSD:BP791436.1,
INSD:AV802980.1,INSD:BE520187.1,INSD:BP605167.1,
INSD:AV541497.1,INSD:AV799339.1,INSD:BP591723.1,
INSD:BP587287.1,INSD:ES097287.1,INSD:EH919693.1,
INSD:BP628340.1,INSD:AV544106.1,INSD:AV559207.1,
INSD:AV537411.1,INSD:AV803978.1,INSD:EL296103.1,
INSD:BP656544.1,INSD:AV533475.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK220727.1,INSD:BX826218.1,INSD:BX825413.1"
/note="eukaryotic translation initiation factor 4A1
(EIF4A1); FUNCTIONS IN: protein binding, ATP-dependent
helicase activity, translation initiation factor activity;
INVOLVED IN: translational initiation; LOCATED IN:
cytosol, membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 16 growth stages; CONTAINS InterPro
DOMAIN/s: RNA helicase, DEAD-box type, Q motif
(InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box
type, N-terminal (InterPro:IPR011545), RNA helicase,
ATP-dependent, DEAD-box, conserved site
(InterPro:IPR000629), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: eif4a-2 (TAIR:AT1G54270.1); Has
49587 Blast hits to 48995 proteins in 3133 species: Archae
- 779; Bacteria - 27305; Metazoa - 6121; Fungi - 4627;
Plants - 2620; Viruses - 17; Other Eukaryotes - 8118
(source: NCBI BLink)."
/db_xref="TAIR:AT3G13920"
/db_xref="Araport:AT3G13920"
intron_pos 13:2 (1/3)
intron_pos 48:1 (2/3)
intron_pos 192:0 (3/3)
BEGIN
1 MHVSLTRNSM KCELEGQDEF FTSYDDVHES FDAMGLQENL LRGIYAYGFE KPSAIQQRGI
61 VPFCKGLDVI QQAQSGTGKT ATFCSGVLQQ LDFSLIQCQA LVLAPTRELA QQIEKVMRAL
121 GDYLGVKVHA CVGGTSVRED QRILQAGVHV VVGTPGRVFD MLKRQSLRAD NIKMFVLDEA
181 DEMLSRGFKD QIYDIFQLLP PKIQVGVFSA TMPPEALEIT RKFMSKPVRI LVKRDELTLE
241 GIKQFYVNVE KEEWKLETLC DLYETLAITQ SVIFVNTRRK VDWLTDKMRS RDHTVSATHG
301 DMDQNTRDII MREFRSGSSR VLITTDLLAR GIDVQQVSLV INFDLPTQPE NYLHRIGRSG
361 RFGRKGVAIN FVTRDDERML FDIQKFYNVV VEELPSNVAD LL
//