LOCUS AEE75364.1 602 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Lysyl-tRNA synthetase, class II protein.
ACCESSION CP002686-2449
PROTEIN_ID AEE75364.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="OVA5"
/locus_tag="AT3G13490"
/gene_synonym="ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE
2"
/gene_synonym="ATKRS-2"
/gene_synonym="OVULE ABORTION 5"
/inference="Similar to RNA sequence,
EST:INSD:EG455105.1,INSD:EG493827.1,INSD:EL013980.1,
INSD:BE530343.1,INSD:EL185487.1,INSD:AV819964.1,
INSD:EL177381.1,INSD:BX839687.1,INSD:BP782285.1,
INSD:EL213544.1,INSD:AV564273.1,INSD:ES098353.1,
INSD:EG455106.1,INSD:AV792569.1,INSD:BP789368.1,
INSD:AV792553.1,INSD:AV531104.1,INSD:EG449831.1,
INSD:AV550651.1,INSD:EH897663.1,INSD:T76160.1,
INSD:F14298.1,INSD:AV562101.1,INSD:AV813434.1,
INSD:EH940303.1,INSD:BX839361.1,INSD:EG493828.1,
INSD:AV806128.1,INSD:EH961116.1,INSD:EG449820.1,
INSD:EL129827.1,INSD:AV781968.1,INSD:AA404918.1,
INSD:EH817094.1,INSD:EL977371.1,INSD:EL003765.1,
INSD:EL068534.1,INSD:EH979821.1,INSD:EH884708.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY039937.1,INSD:BT002317.1"
/note="OVULE ABORTION 5 (OVA5); FUNCTIONS IN:
aminoacyl-tRNA ligase activity, nucleotide binding, ATP
binding, nucleic acid binding, lysine-tRNA ligase
activity; INVOLVED IN: tRNA aminoacylation for protein
translation, ovule development; LOCATED IN: mitochondrion,
chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Nucleic acid-binding, OB-fold
(InterPro:IPR012340), Nucleic acid binding, OB-fold,
tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA
synthetase, class II, conserved domain
(InterPro:IPR006195), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II
(D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class
II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA
synthetase, class II (D/K/N)-like (InterPro:IPR018150),
Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST
Arabidopsis thaliana protein match is: lysyl-tRNA
synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to
22097 proteins in 2943 species: Archae - 404; Bacteria -
18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses -
0; Other Eukaryotes - 6441 (source: NCBI BLink)."
/db_xref="TAIR:AT3G13490"
/db_xref="Araport:AT3G13490"
intron_pos 92:0 (1/13)
intron_pos 165:0 (2/13)
intron_pos 202:1 (3/13)
intron_pos 238:2 (4/13)
intron_pos 258:0 (5/13)
intron_pos 281:0 (6/13)
intron_pos 317:0 (7/13)
intron_pos 348:0 (8/13)
intron_pos 383:0 (9/13)
intron_pos 452:0 (10/13)
intron_pos 483:2 (11/13)
intron_pos 514:0 (12/13)
intron_pos 573:0 (13/13)
BEGIN
1 MEALKVWSLT ATPLKQLLRL SSSSTRLATT IYGRRSYHLS PALRCASAAS SSSSSATTAE
61 TSKPSGRNRR SASSSNSTSD REAIRSIRLK KVEELRGQGL EPYAYKWEKS HSANQLQEIY
121 KHLANGEESD NEIDCVSIAG RVVARRAFGK LAFLTLRDDS GTIQLYCEKE RLSDDQFEQL
181 KQFIDIGDIL GASGSMKRTE KGELSICVNS FSILTKSLLP LPDKYHGLTD IDKRYRQRYV
241 DMIANPEVAD VFRRRAKIVS EIRKTVESFG YLEVETPVLQ GAAGGAEARP FVTFHNSLGR
301 DLYLRIATEL HLKRMLVGGF EKVYEIGRIF RNEGISTRHN PEFTTIEMYE AYSDYHSMMD
361 MAELIVTQCS MAVNGKLTID YQGTEICLER PWRRETMHNL VKEITGINFS ELGEDLGNAK
421 DTVLLALQDV LEPKDKSGIR ACSSLGHLLN EIFEVVVEPK LVQPTFVLDY PIEISPLAKP
481 HRGNAGLTER FELFICGREM ANAFSELTDP VDQRTRLEEQ VRQHNAKRAE AVRESPEPNA
541 KKDDDDDESY EVTLDEDFLT ALEYGMPPAS GMGLGIDRLV MLLTNSASIR DVIAFPVLKL
601 QQ
//