LOCUS       AEE75324.1               413 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana ubiquitin family protein protein.
ACCESSION   CP002686-2394
PROTEIN_ID  AEE75324.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="DDI1"
                     /locus_tag="AT3G13235"
                     /gene_synonym="DNA-damage inducible 1"
                     /note="ubiquitin family protein; FUNCTIONS IN:
                     aspartic-type endopeptidase activity; LOCATED IN: cytosol,
                     nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED
                     DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
                     Ubiquitin-associated/translation elongation factor EF1B,
                     N-terminal (InterPro:IPR000449), Peptidase aspartic
                     (InterPro:IPR021109), Ubiquitin subgroup
                     (InterPro:IPR019956), Peptidase aspartic, eukaryotic
                     predicted (InterPro:IPR019103),
                     Ubiquitin-associated/translation elongation factor EF1B,
                     N-terminal, eukaryote (InterPro:IPR015940), Peptidase A2A,
                     retrovirus, catalytic (InterPro:IPR001995), Ubiquitin
                     (InterPro:IPR000626), Ubiquitin supergroup
                     (InterPro:IPR019955), UBA-like (InterPro:IPR009060)."
                     /db_xref="TAIR:AT3G13235"
                     /db_xref="Araport:AT3G13235"
     intron_pos      23:0 (1/14)
     intron_pos      34:0 (2/14)
     intron_pos      77:2 (3/14)
     intron_pos      117:0 (4/14)
     intron_pos      156:0 (5/14)
     intron_pos      178:0 (6/14)
     intron_pos      199:0 (7/14)
     intron_pos      214:0 (8/14)
     intron_pos      234:2 (9/14)
     intron_pos      266:0 (10/14)
     intron_pos      297:0 (11/14)
     intron_pos      320:1 (12/14)
     intron_pos      344:0 (13/14)
     intron_pos      372:0 (14/14)
BEGIN
        1 MRITVMTAGE QIITLDVDSQ ETVENVKALL EVESNVPIQQ QQLLYNGNEM GNSDKLSALG
       61 VKDDDLLMMM VSNASSGATS AAGNDLGMNP DGSALNPAAF QQHIRGDSNL MGQLFQNDPE
      121 LAQVISGSDL NKLQDVLRAR HRQRSVLQRQ KEEELALLYA DPFDVEAQRK IEAAIRQKGI
      181 DENWEAALEH NPEGFARVIM LYVDMEVNGV PLKAFVDSGA QSTIISKSCA ERCGLLRLMD
      241 QRYKGIAHGV GQTEILGRIH VAPIKIGNNF YPCSFVVLDS PNMEFLFGLD MLRKHQCTID
      301 LKENVMTVGG GEVSVPFLQE KDIPSRFLDE ERVPNDASSS GATVPSGFTE KKNNTVANPT
      361 SQQPKRQNTS EGPEFEAKIA KLVELGFSRD SVIQALKLFE GNEEQAAGFL FGG
//