LOCUS AEE75306.1 523 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NOL1/NOP2/sun family protein / antitermination
NusB domain-containing protein protein.
ACCESSION CP002686-2373
PROTEIN_ID AEE75306.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G13180"
/inference="Similar to RNA sequence,
EST:INSD:ES093301.1,INSD:EG421497.1,INSD:AI995609.1,
INSD:AV441186.1,INSD:DR237760.1,INSD:EH823904.1,
INSD:AV782711.1,INSD:DR237761.1,INSD:BP821388.1,
INSD:BX838995.1,INSD:DR381295.1,INSD:AV814678.1,
INSD:BP791738.1,INSD:EL241551.1,INSD:BP868645.1,
INSD:BP628920.1,INSD:BX840527.1,INSD:EL214052.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY072189.1,INSD:AY117322.1,INSD:AK226254.1"
/note="NOL1/NOP2/sun family protein / antitermination NusB
domain-containing protein; FUNCTIONS IN: RNA binding;
INVOLVED IN: regulation of transcription, DNA-dependent;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic
nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44
(InterPro:IPR006027); BEST Arabidopsis thaliana protein
match is: S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein (TAIR:AT5G55920.1);
Has 10280 Blast hits to 10234 proteins in 2431 species:
Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364;
Plants - 311; Viruses - 0; Other Eukaryotes - 1808
(source: NCBI BLink)."
/db_xref="TAIR:AT3G13180"
/db_xref="Araport:AT3G13180"
intron_pos 39:1 (1/16)
intron_pos 60:1 (2/16)
intron_pos 112:0 (3/16)
intron_pos 150:0 (4/16)
intron_pos 172:0 (5/16)
intron_pos 200:0 (6/16)
intron_pos 229:0 (7/16)
intron_pos 259:2 (8/16)
intron_pos 280:0 (9/16)
intron_pos 300:0 (10/16)
intron_pos 320:1 (11/16)
intron_pos 356:1 (12/16)
intron_pos 396:0 (13/16)
intron_pos 420:0 (14/16)
intron_pos 448:2 (15/16)
intron_pos 481:0 (16/16)
BEGIN
1 MAQLLSFRVY LSAETQKASP GSFKRTQKTR KPFSPDRRGP VAPSRKSQNL NLEVSPHRAV
61 SAVRLMRIEY GGAFADLLNE KGKGSGSNEM SYVERTIGFR TRDLDDRDLR LVTDVVGGTI
121 RWRRYLDHLI GSLCHNERTF RNMEPLLLQI LRIGVYEIIK RDMPPYAVVD ENVRLAKVAL
181 RPGAGDFVNG ILRKLVSLKE KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL
241 DEATKLMIWN NNDPGFSLRA NTGRDITRAD LVERLNSLKV PHELSLHLEE FVRIKTGLQT
301 VVQAGLLKEG ICSVQDESAG LIVSVVKPQP GERIMDACAA PGGKTLFMAS CLKGQGMIYA
361 MDVNEGRLRI LGETAKSHQV DGLITTIHSD LRVFAETNEV QYDKVLLDAP CSGLGVLSKR
421 ADLRWNRKLE DMLELTKLQD ELLDSASKLV KHGGVLVYST CSIDPEENEG RVEAFLLRHP
481 EFTIDPVTSF VPSSFVTSQG FFLSNPVKHS LDGAFAARLV RAL
//