LOCUS AEE75288.1 403 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Polyketide cyclase/dehydrase and
lipid transport superfamily protein protein.
ACCESSION CP002686-2349
PROTEIN_ID AEE75288.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G13062"
/inference="Similar to RNA sequence,
EST:INSD:EL014580.1,INSD:EL011401.1,INSD:AV787920.1,
INSD:EL315013.1,INSD:AU230929.1,INSD:EL051735.1,
INSD:ES088202.1,INSD:DR374227.1,INSD:BP796722.1,
INSD:EL300424.1,INSD:AV565454.1,INSD:EL330185.1,
INSD:EL118228.1,INSD:BP588834.1,INSD:EH836645.1,
INSD:BP570726.1,INSD:DR192905.1,INSD:EL280272.1,
INSD:BP861617.1,INSD:AV827238.1,INSD:EL981209.1,
INSD:BP665814.1,INSD:BP859725.1,INSD:EL276106.1,
INSD:BP828302.1,INSD:CB257592.1,INSD:AV534108.1,
INSD:EH955839.1,INSD:EL204009.1,INSD:AV797613.1,
INSD:EL339434.1,INSD:BP626279.1,INSD:EG459903.1,
INSD:EL249584.1,INSD:EG526995.1,INSD:BP801122.1,
INSD:EL306000.1,INSD:DR192906.1,INSD:BP843468.1,
INSD:BP665123.1,INSD:EL179213.1,INSD:CB257987.1,
INSD:EL255824.1,INSD:EH926407.1,INSD:EL321347.1,
INSD:EL234770.1,INSD:EG526994.1,INSD:EH892695.1,
INSD:EL329200.1,INSD:EH908403.1,INSD:AU239601.1,
INSD:EL237198.1,INSD:EL250240.1,INSD:DR192903.1,
INSD:DR192904.1,INSD:BP666685.1,INSD:AV539725.1,
INSD:EH871213.1,INSD:EL191761.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823851.1,INSD:BX824044.1,INSD:AY133605.1,
INSD:AY037178.1,INSD:AK118729.1"
/note="Polyketide cyclase/dehydrase and lipid transport
superfamily protein; CONTAINS InterPro DOMAIN/s:
Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis
thaliana protein match is: Polyketide cyclase/dehydrase
and lipid transport superfamily protein
(TAIR:AT1G55960.1); Has 332 Blast hits to 332 proteins in
66 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi
- 0; Plants - 157; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink)."
/db_xref="TAIR:AT3G13062"
/db_xref="Araport:AT3G13062"
intron_pos 78:2 (1/5)
intron_pos 128:0 (2/5)
intron_pos 215:0 (3/5)
intron_pos 242:1 (4/5)
intron_pos 308:0 (5/5)
BEGIN
1 MNSGDTLSTL AQFISSSERF FRRADGDVVF CYCWATVLAL VFILLYQFFL SRKFRFFSHA
61 SSSSPVVSVS QSLSSQSGIS TTLVSDEDLK GLIQKLGERS EDAEIWEDVI KKSNPRISYT
121 AKCCKPTDGS PMKYLSTTVF EDCSPEVLRD FYMDNEYRKQ WDKTVVEHEQ LQVDSNSGIE
181 IGRTIKKFPL LTPREYVLAW KLWEGKDKFY CFIKECDHNM VPQQRKYVRV SYFRSGWRIR
241 KVPGRNACEI HMVHQEDAGL NVEMAKLAFS RGIWSYVCKM ENALRKYIAT SHRPQGPTLS
301 AVSLMKKIPS ELESQTDDIT NSSGTTTSGM HTGEGAKRKK LLRKPSKKLI ANGMLLVGGA
361 VGGAICLSRG HSALGAKVAL AYFLSKMRKR GAQLSQTSQN AGI
//