LOCUS AEE75286.1 411 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Polyketide cyclase/dehydrase and
lipid transport superfamily protein protein.
ACCESSION CP002686-2348
PROTEIN_ID AEE75286.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G13062"
/inference="Similar to RNA sequence,
EST:INSD:EL014580.1,INSD:EL011401.1,INSD:AV787920.1,
INSD:EL315013.1,INSD:AU230929.1,INSD:EL051735.1,
INSD:ES088202.1,INSD:DR374227.1,INSD:EL300424.1,
INSD:AV565454.1,INSD:EL330185.1,INSD:EL118228.1,
INSD:BP588834.1,INSD:EH836645.1,INSD:BP570726.1,
INSD:DR192905.1,INSD:EL280272.1,INSD:BP861617.1,
INSD:EL981209.1,INSD:BP665814.1,INSD:BP859725.1,
INSD:EL276106.1,INSD:BP828302.1,INSD:AV534108.1,
INSD:BU636210.1,INSD:EH955839.1,INSD:EL204009.1,
INSD:AV797613.1,INSD:EL339434.1,INSD:BP626279.1,
INSD:EG459903.1,INSD:EL249584.1,INSD:BP801122.1,
INSD:EL306000.1,INSD:DR192906.1,INSD:BP843468.1,
INSD:BP665123.1,INSD:EL179213.1,INSD:CB257987.1,
INSD:EH926407.1,INSD:EL321347.1,INSD:EL234770.1,
INSD:EH892695.1,INSD:EL329200.1,INSD:EH908403.1,
INSD:EL237198.1,INSD:EL250240.1,INSD:DR192903.1,
INSD:DR192904.1,INSD:BP666685.1,INSD:AV539725.1,
INSD:EH871213.1,INSD:EL191761.1"
/note="Polyketide cyclase/dehydrase and lipid transport
superfamily protein; CONTAINS InterPro DOMAIN/s:
Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis
thaliana protein match is: Polyketide cyclase/dehydrase
and lipid transport superfamily protein
(TAIR:AT1G55960.1); Has 323 Blast hits to 323 proteins in
61 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi
- 0; Plants - 155; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink)."
/db_xref="TAIR:AT3G13062"
/db_xref="Araport:AT3G13062"
intron_pos 78:2 (1/5)
intron_pos 136:0 (2/5)
intron_pos 223:0 (3/5)
intron_pos 250:1 (4/5)
intron_pos 316:0 (5/5)
BEGIN
1 MNSGDTLSTL AQFISSSERF FRRADGDVVF CYCWATVLAL VFILLYQFFL SRKFRFFSHA
61 SSSSPVVSVS QSLSSQSGIS TTLVSDEDLK GLIQKLGERS EDAEIWEDVI KKSNPRISYT
121 AKCCKPTVIS KFYLCDGSPM KYLSTTVFED CSPEVLRDFY MDNEYRKQWD KTVVEHEQLQ
181 VDSNSGIEIG RTIKKFPLLT PREYVLAWKL WEGKDKFYCF IKECDHNMVP QQRKYVRVSY
241 FRSGWRIRKV PGRNACEIHM VHQEDAGLNV EMAKLAFSRG IWSYVCKMEN ALRKYIATSH
301 RPQGPTLSAV SLMKKIPSEL ESQTDDITNS SGTTTSGMHT GEGAKRKKLL RKPSKKLIAN
361 GMLLVGGAVG GAICLSRGHS ALGAKVALAY FLSKMRKRGA QLSQTSQNAG I
//