LOCUS AEE75281.1 449 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana myb-like HTH transcriptional regulator
family protein protein.
ACCESSION CP002686-2335
PROTEIN_ID AEE75281.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G13040"
/gene_synonym="MGH6.22"
/inference="Similar to RNA sequence,
EST:INSD:ES162163.1,INSD:AV793896.1,INSD:DR750835.1,
INSD:AV555681.1,INSD:DR750673.1,INSD:AV825412.1,
INSD:BP578330.1,INSD:BP854709.1,INSD:EL328391.1,
INSD:EL317849.1,INSD:DR271780.1,INSD:DR750528.1,
INSD:DR271776.1,INSD:AV533685.1,INSD:DR271775.1,
INSD:EL323859.1,INSD:EH942521.1,INSD:DR271779.1,
INSD:AV803738.1,INSD:DR750672.1,INSD:EL311510.1,
INSD:AV805158.1,INSD:EH926166.1,INSD:BP792956.1,
INSD:EH813701.1,INSD:EG514865.1,INSD:BP783333.1,
INSD:EH940511.1,INSD:DR750527.1,INSD:DR271777.1,
INSD:AV792327.1,INSD:EH935935.1,INSD:EH886314.1,
INSD:BP610418.1,INSD:EL251528.1,INSD:EL186128.1,
INSD:BP792399.1,INSD:DR271773.1,INSD:DR271778.1,
INSD:DR750364.1,INSD:DR750363.1,INSD:EG514866.1,
INSD:AV823295.1,INSD:BP830962.1,INSD:DR271774.1,
INSD:DR750815.1,INSD:EH987366.1,INSD:BP777727.1,
INSD:BP795364.1,INSD:AV441886.1,INSD:AV784235.1,
INSD:AV791223.1,INSD:DR379940.1,INSD:EH971573.1,
INSD:ES090212.1,INSD:DR750816.1,INSD:EL077144.1,
INSD:AV519152.1,INSD:EH965132.1,INSD:ES013863.1,
INSD:BP661230.1,INSD:AV439993.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824693.1,INSD:AY096674.1,INSD:AY084738.1,
INSD:BX823916.1,INSD:AY050889.1,INSD:BX824456.1,
INSD:BX822690.1,INSD:BX823158.1"
/note="myb-like HTH transcriptional regulator family
protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like
(InterPro:IPR009057), Myb, DNA-binding
(InterPro:IPR014778), HTH transcriptional regulator,
Myb-type, DNA-binding (InterPro:IPR017930), Myb-like
DNA-binding domain, SHAQKYF class (InterPro:IPR006447),
Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
thaliana protein match is: phosphate starvation response 1
(TAIR:AT4G28610.1); Has 2193 Blast hits to 2140 proteins
in 145 species: Archae - 2; Bacteria - 18; Metazoa - 253;
Fungi - 37; Plants - 1676; Viruses - 0; Other Eukaryotes -
207 (source: NCBI BLink)."
/db_xref="TAIR:AT3G13040"
/db_xref="Araport:AT3G13040"
intron_pos 198:0 (1/6)
intron_pos 266:1 (2/6)
intron_pos 292:0 (3/6)
intron_pos 305:1 (4/6)
intron_pos 329:2 (5/6)
intron_pos 353:0 (6/6)
BEGIN
1 MYIKAIMNRH RLLSAATDEC NKKLGQACSS SLSPVHNFLN VQPEHRKTPF IRSQSPDSPG
61 QLWPKNSSQS TFSRSSTFCT NLYLSSSSTS ETQKHLGNSL PFLPDPSSYT HSASGVESAR
121 SPSIFTEDLG NQCDGGNSGS LLKDFLNLSG DACSDGDFHD FGCSNDSYCL SDQMELQFLS
181 DELELAITDR AETPRLDEIY ETPLASNPVT RLSPSQSCVP GAMSVDVVSS HPSPGSAANQ
241 KSRMRWTPEL HESFVKAVIK LEGPEKATPK AVKKLMNVEG LTIYHVKSHL QKYRLAKYMP
301 EKKEEKRTDN SEEKKLALSK SEADEKKKGA IQLTEALRMQ MEVQKQLHEQ LEVQRVLQLR
361 IEEHAKYLEK MLEEQRKTGR WISSSSQTVL SPSDDSIPDS QNMSKTKASS PQPPLPAENK
421 ASETEDDKCE SPQKRRRLEN IAESEDPKR
//