LOCUS AEE75272.2 221 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribonuclease PH45A protein.
ACCESSION CP002686-2323
PROTEIN_ID AEE75272.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RRP45a"
/locus_tag="AT3G12990"
/gene_synonym="MGH6.11"
/gene_synonym="ribonuclease PH45A"
/inference="Similar to RNA sequence,
EST:INSD:EH817379.1,INSD:EL051771.1,INSD:AV565347.1,
INSD:EL116662.1,INSD:EH960897.1,INSD:BP632922.1,
INSD:EL246816.1,INSD:DR378990.1,INSD:AV560304.1,
INSD:EH964913.1,INSD:EL320000.1,INSD:BP639632.1,
INSD:AV818669.1,INSD:BP670368.1,INSD:ES094546.1,
INSD:EL981315.1,INSD:ES041876.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT003077.1,INSD:BX825528.1"
/note="ribonuclease PH45A (RRP45a); CONTAINS InterPro
DOMAIN/s: Exoribonuclease, phosphorolytic domain 2
(InterPro:IPR015847), Exoribonuclease, phosphorolytic
domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain
2-type fold (InterPro:IPR020568); BEST Arabidopsis
thaliana protein match is: 3'-5'-exoribonuclease family
protein (TAIR:AT3G60500.3); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12990"
/db_xref="Araport:AT3G12990"
intron_pos 46:2 (1/4)
intron_pos 116:2 (2/4)
intron_pos 148:2 (3/4)
intron_pos 187:0 (4/4)
BEGIN
1 MEGRLNNMWR LTVNESKFVE SALQSELRVD GRGLYDYRKL TIKFGKEYGS SQVQLGQTHV
61 MAFVTAQLVQ PYKDRPSEGS FSIFTEFSPM ADPSFEPGHP GESAVELGRI IDRALRESRA
121 VDTESLCVLA GKLVWSVRID LHILDNGGNL VDAANVAALA ALMTFRRPDC TVGGDNSQDV
181 IIHPPEEREP LPLIIHHLPI AFTFGFFNKG SILVKKLCFV Y
//