LOCUS AEE75247.1 298 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana short-chain dehydrogenase-reductase B protein.
ACCESSION CP002686-2289
PROTEIN_ID AEE75247.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SDRB"
/locus_tag="AT3G12800"
/gene_synonym="AT3G12790"
/gene_synonym="DECR"
/gene_synonym="short-chain dehydrogenase-reductase B"
/inference="Similar to RNA sequence,
EST:INSD:EL032297.1,INSD:BP575983.1,INSD:ES156651.1,
INSD:BP630251.1,INSD:ES187379.1,INSD:ES192589.1,
INSD:EG466836.1,INSD:EL325124.1,INSD:DR314092.1,
INSD:ES079496.1,INSD:F19881.1,INSD:ES170683.1,
INSD:BP578413.1,INSD:BP634337.1,INSD:BP851263.1,
INSD:ES112785.1,INSD:BP670974.1,INSD:ES096005.1,
INSD:DR314098.1,INSD:BP633103.1,INSD:EG466835.1,
INSD:ES129398.1,INSD:CF773508.1,INSD:BP627202.1,
INSD:AV567100.1,INSD:EL127918.1,INSD:EH977907.1,
INSD:EH834825.1,INSD:EL248734.1,INSD:DR314094.1,
INSD:BE521285.1,INSD:DR314093.1,INSD:ES083167.1,
INSD:BP794051.1,INSD:BP576424.1,INSD:BP865341.1,
INSD:AV787568.1,INSD:AV828444.1,INSD:BP635972.1,
INSD:EL019697.1,INSD:EL238693.1,INSD:EH976594.1,
INSD:BP570918.1,INSD:BP864194.1,INSD:EL237018.1,
INSD:DR314091.1,INSD:ES211623.1,INSD:EL024322.1,
INSD:BP860858.1,INSD:EL087117.1,INSD:BP564285.1,
INSD:EL334897.1,INSD:BP667622.1,INSD:BP568721.1,
INSD:BP568328.1,INSD:BP623411.1,INSD:BP640681.1,
INSD:BP630206.1,INSD:EH845428.1,INSD:BE521286.1,
INSD:EL338549.1,INSD:DR314102.1,INSD:BP797805.1,
INSD:EH822301.1,INSD:BP624680.1,INSD:BP572210.1,
INSD:BP659558.1,INSD:EL230396.1,INSD:BP658783.1,
INSD:BP636925.1,INSD:AV800630.1,INSD:BP628248.1,
INSD:BP596443.1,INSD:EL317630.1,INSD:EL341255.1,
INSD:EL198928.1,INSD:EL169899.1,INSD:DR314099.1,
INSD:DR314104.1,INSD:BP628917.1,INSD:EH811157.1,
INSD:ES194321.1,INSD:BP857105.1,INSD:BP630046.1,
INSD:DR362402.1,INSD:BP851616.1,INSD:BP622728.1,
INSD:EH820852.1,INSD:BP626429.1,INSD:BP847730.1,
INSD:EL033625.1,INSD:DR314100.1,INSD:ES170985.1,
INSD:DR314101.1,INSD:DR314097.1,INSD:BP861676.1,
INSD:BP563224.1,INSD:EH806232.1,INSD:DR314103.1,
INSD:BP588561.1,INSD:EL241637.1,INSD:EL014776.1,
INSD:AV788978.1,INSD:EH930257.1,INSD:BP820387.1,
INSD:EL334844.1,INSD:EL205224.1,INSD:BP572868.1,
INSD:EL299158.1,INSD:AI998108.1,INSD:ES209827.1,
INSD:EL263075.1,INSD:ES077761.1,INSD:DR370047.1,
INSD:EH911369.1,INSD:DR314090.1,INSD:BP627175.1,
INSD:AV801440.1,INSD:DR314095.1,INSD:ES189428.1,
INSD:DR314105.1,INSD:ES173303.1,INSD:BP650885.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK176631.1,INSD:AK175900.1,INSD:AK176909.1,
INSD:AK175259.1,INSD:AK176776.1,INSD:AY114700.1,
INSD:AK221326.1,INSD:AK176305.1,INSD:AK176892.1,
INSD:BX842405.1,INSD:AK176508.1,INSD:BX842402.1,
INSD:AK176181.1,INSD:AY072396.1"
/note="short-chain dehydrogenase-reductase B (SDRB);
FUNCTIONS IN: oxidoreductase activity, binding, catalytic
activity; INVOLVED IN: oxidation reduction, metabolic
process; LOCATED IN: peroxisome, plasma membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding
domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase
(InterPro:IPR002347), Short-chain dehydrogenase/reductase
SDR (InterPro:IPR002198); BEST Arabidopsis thaliana
protein match is: NAD(P)-binding Rossmann-fold superfamily
protein (TAIR:AT2G07640.1); Has 108804 Blast hits to
108592 proteins in 3545 species: Archae - 967; Bacteria -
72835; Metazoa - 4412; Fungi - 5364; Plants - 2598;
Viruses - 2; Other Eukaryotes - 22626 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G12800"
/db_xref="Araport:AT3G12800"
intron_pos 63:0 (1/4)
intron_pos 116:1 (2/4)
intron_pos 174:0 (3/4)
intron_pos 248:1 (4/4)
BEGIN
1 MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG
61 IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN FLAAAEDLSP NGFRTVLDID
121 AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT
181 RNLALEWGTD YDIRVNGIAP GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA
241 LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
//