LOCUS AEE75238.1 312 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA glycosylase superfamily protein protein.
ACCESSION CP002686-2279
PROTEIN_ID AEE75238.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G12710"
/inference="Similar to RNA sequence,
EST:INSD:EL313504.1,INSD:DR279287.1,INSD:EH800359.1,
INSD:BP583301.1,INSD:DR279277.1,INSD:EL230010.1,
INSD:DR279268.1,INSD:EL083528.1,INSD:BP619447.1,
INSD:DR279291.1,INSD:BP571182.1,INSD:BP573090.1,
INSD:EL235443.1,INSD:BP576503.1,INSD:DR279278.1,
INSD:DR279271.1,INSD:DR279274.1,INSD:DR279283.1,
INSD:EL287254.1,INSD:EL057601.1,INSD:DR279262.1,
INSD:ES100742.1,INSD:BP845409.1,INSD:T43955.1,
INSD:AI995915.1,INSD:CK119942.1,INSD:AV565580.1,
INSD:DR279292.1,INSD:DR279259.1,INSD:EH973320.1,
INSD:DR279263.1,INSD:BP608613.1,INSD:AV522587.1,
INSD:DR279282.1,INSD:ES179800.1,INSD:EL123874.1,
INSD:EH901601.1,INSD:AU226397.1,INSD:DR279286.1,
INSD:AA395301.1,INSD:EH840939.1,INSD:DR279290.1,
INSD:DR379950.1,INSD:DR279267.1,INSD:BP630646.1,
INSD:AV442621.1,INSD:DR279265.1,INSD:EG470163.1,
INSD:DR279280.1,INSD:ES015168.1,INSD:EL316111.1,
INSD:EL114113.1,INSD:BP608057.1,INSD:DR279266.1,
INSD:EH825895.1,INSD:EL015381.1,INSD:DR279281.1,
INSD:DR279269.1,INSD:DR279275.1,INSD:BP798092.1,
INSD:DR279285.1,INSD:DR279272.1,INSD:AV441283.2,
INSD:EL049005.1,INSD:BP852452.1,INSD:AU235659.1,
INSD:DR279258.1,INSD:ES122096.1,INSD:DR279288.1,
INSD:DR279264.1,INSD:BP602455.1,INSD:BP853847.1,
INSD:DR279279.1,INSD:DR279270.1,INSD:EH796897.1,
INSD:BP582755.1,INSD:DR279261.1,INSD:AV532752.1,
INSD:DR279273.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084745.1,INSD:AK227727.1,INSD:BX825507.1,
INSD:BX822095.1"
/note="DNA glycosylase superfamily protein; FUNCTIONS IN:
DNA-3-methyladenine glycosylase I activity, catalytic
activity; INVOLVED IN: DNA repair, base-excision repair;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase
(InterPro:IPR011257), Methyladenine glycosylase
(InterPro:IPR005019); BEST Arabidopsis thaliana protein
match is: DNA glycosylase superfamily protein
(TAIR:AT5G44680.1); Has 3673 Blast hits to 3673 proteins
in 1573 species: Archae - 10; Bacteria - 3171; Metazoa -
4; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes
- 322 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12710"
/db_xref="Araport:AT3G12710"
intron_pos 132:1 (1/2)
intron_pos 151:2 (2/2)
BEGIN
1 MSKTEAISLT KRGMLPPSSC NSLMDRSESL KRDSVMGNGA AKVRGSLERK KSKSFKEGDS
61 YSSWLITEAP GSIAAVRREQ VAAQQALRKL KIAHYGRSKS TINFTSSKVV PLLNPNPNPH
121 PQRCSFLTPT SDPIYVAYHD EEWGVPVHDD KTLFELLTLS GAQVGSDWTS TLRKRHDYRK
181 AFMEFEAEVV AKLTEKEMNA ISIEYKIEMS KVRGVVENAK KIVEIKKAFV SLEKYLWGFV
241 NHKPISTNYK LGHKIPVKTS KSESISKDMV RRGFRFVGPT VVHSFMQAAG LTNDHLITCC
301 RHAPCTLLAT NP
//