LOCUS AEE75212.1 638 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana XH/XS domain-containing protein protein.
ACCESSION CP002686-2245
PROTEIN_ID AEE75212.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="FDM3"
/locus_tag="AT3G12550"
/gene_synonym="factor of DNA methylation 3"
/note="XH/XS domain-containing protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s:
Domain of unknown function XS (InterPro:IPR005380), Domain
of unknown function XH (InterPro:IPR005379), Domain of
unknown function, putative Zinc finger, XS/XH
(InterPro:IPR005381); BEST Arabidopsis thaliana protein
match is: XH/XS domain-containing protein
(TAIR:AT3G48670.2)."
/db_xref="TAIR:AT3G12550"
/db_xref="Araport:AT3G12550"
intron_pos 126:1 (1/6)
intron_pos 306:1 (2/6)
intron_pos 367:0 (3/6)
intron_pos 397:0 (4/6)
intron_pos 493:0 (5/6)
intron_pos 563:0 (6/6)
BEGIN
1 MNNKLSDFEK NLYKKLKSGK LEVKVSYRTF LCPYCPDNKK KVGLYVDILQ HASGVGNSQS
61 KKRSLTEKAS HRALAKYLIK DLAHYATSTI SKRLKARTSF IPAETGDAPI IYDDAQFEKL
121 VWPWKGVLVN IPTTSTEDGR SCTGESGPKL KDELIRRGFN PIRVRTVWDR FGHSGTGIVE
181 FNRDWNGLQD ALVFKKAYEG DGHGKKDWLC GATDSSLYAW LANADDYYRA NILGENLRKM
241 GDLKSIYRFA EEEARKDQKL LQRLNFMVEN KQYRLKKLQI KYSQDSVKLK YETEEKEKIL
301 RAYSEDLTGR QQKSTDHFNR IFADHEKQKV QLESQIKELE IRKLELAKRE AENETQRKIV
361 AKELEQNAAI NSYVQLSALE QQKTREKAQR LAVDHKMQKE KLHKRIAALE RQLDQKQELE
421 LEVQQLKSQL SVMRLVELDS GSEIVNKVET FLRDLSETEG ELAHLNQFNQ DLVVQERKSN
481 DELQEARRAL ISNLRDMGLH IGVKRMGELD TKPFMKAMRI KYCQEDLEDW AVEVIQLWEE
541 YLKDPDWHPF KRIKLETAET IVEVIDEDDE KLRTLKNELG DDAYQAVANA LLEINEYNPS
601 GRYISSELWN FREDRKATLE EGVNSLLEQW NQAKHLKS
//