LOCUS AEE75211.1 638 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana XH/XS domain-containing protein protein.
ACCESSION CP002686-2244
PROTEIN_ID AEE75211.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="FDM3"
/locus_tag="AT3G12550"
/gene_synonym="factor of DNA methylation 3"
/inference="Similar to RNA sequence,
EST:INSD:ES122735.1,INSD:EL978357.1,INSD:EL983302.1,
INSD:ES192055.1,INSD:ES178726.1,INSD:EL979407.1,
INSD:EH968797.1,INSD:EL091964.1,INSD:ES114385.1,
INSD:ES102840.1,INSD:BE525337.1,INSD:ES052758.1,
INSD:EL249800.1,INSD:EL986519.1"
/note="XH/XS domain-containing protein; CONTAINS InterPro
DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380), Domain of unknown function XH
(InterPro:IPR005379), Domain of unknown function, putative
Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis
thaliana protein match is: XH/XS domain-containing protein
(TAIR:AT3G48670.2); Has 27730 Blast hits to 18970 proteins
in 1489 species: Archae - 327; Bacteria - 3496; Metazoa -
13128; Fungi - 1662; Plants - 1039; Viruses - 83; Other
Eukaryotes - 7995 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12550"
/db_xref="Araport:AT3G12550"
intron_pos 126:1 (1/6)
intron_pos 306:1 (2/6)
intron_pos 367:0 (3/6)
intron_pos 397:0 (4/6)
intron_pos 493:0 (5/6)
intron_pos 563:0 (6/6)
BEGIN
1 MNNKLSDFEK NLYKKLKSGK LEVKVSYRTF LCPYCPDNKK KVGLYVDILQ HASGVGNSQS
61 KKRSLTEKAS HRALAKYLIK DLAHYATSTI SKRLKARTSF IPAETGDAPI IYDDAQFEKL
121 VWPWKGVLVN IPTTSTEDGR SCTGESGPKL KDELIRRGFN PIRVRTVWDR FGHSGTGIVE
181 FNRDWNGLQD ALVFKKAYEG DGHGKKDWLC GATDSSLYAW LANADDYYRA NILGENLRKM
241 GDLKSIYRFA EEEARKDQKL LQRLNFMVEN KQYRLKKLQI KYSQDSVKLK YETEEKEKIL
301 RAYSEDLTGR QQKSTDHFNR IFADHEKQKV QLESQIKELE IRKLELAKRE AENETQRKIV
361 AKELEQNAAI NSYVQLSALE QQKTREKAQR LAVDHKMQKE KLHKRIAALE RQLDQKQELE
421 LEVQQLKSQL SVMRLVELDS GSEIVNKVET FLRDLSETEG ELAHLNQFNQ DLVVQERKSN
481 DELQEARRAL ISNLRDMGLH IGVKRMGELD TKPFMKAMRI KYCQEDLEDW AVEVIQLWEE
541 YLKDPDWHPF KRIKLETAET IVEVIDEDDE KLRTLKNELG DDAYQAVANA LLEINEYNPS
601 GRYISSELWN FREDRKATLE EGVNSLLEQW NQAKHLKS
//