LOCUS AEE75203.1 335 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic chitinase protein.
ACCESSION CP002686-2231
PROTEIN_ID AEE75203.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HCHIB"
/locus_tag="AT3G12500"
/gene_synonym="ATHCHIB"
/gene_synonym="B-CHI"
/gene_synonym="basic chitinase"
/gene_synonym="CHI-B"
/gene_synonym="PATHOGENESIS-RELATED 3"
/gene_synonym="PR-3"
/gene_synonym="PR3"
/inference="Similar to RNA sequence,
EST:INSD:AV537869.1,INSD:BP817789.1,INSD:BP564385.1,
INSD:AV539681.1,INSD:BP799471.1,INSD:BP812854.1,
INSD:BP577074.1,INSD:AV787165.1,INSD:BP798539.1,
INSD:BP598681.1,INSD:BP580136.1,INSD:AV546826.1,
INSD:BP577261.1,INSD:EG424275.1,INSD:BP572163.1,
INSD:CB254573.1,INSD:DR380168.1,INSD:BP632351.1,
INSD:BP802196.1,INSD:AV537674.1,INSD:EG464810.1,
INSD:BP635046.1,INSD:EG464809.1,INSD:EL000201.1,
INSD:AV549936.1,INSD:BP576222.1,INSD:BP576167.1,
INSD:BP793765.1,INSD:BP603704.1,INSD:AV822848.1,
INSD:BP802837.1,INSD:BP581986.1,INSD:AA067518.1,
INSD:EG424286.1,INSD:BP648675.1,INSD:AV828234.1,
INSD:AV552290.1,INSD:AI998076.1,INSD:BP578727.1,
INSD:BP569892.1,INSD:BP564190.1,INSD:AV813307.1,
INSD:EG523700.1,INSD:BP788581.1,INSD:BP575827.1,
INSD:BP820420.1,INSD:BP583297.1,INSD:AV549668.1,
INSD:BP846820.1,INSD:AV789484.1,INSD:BP628675.1,
INSD:BP803688.1,INSD:AV783706.1,INSD:BP581105.1,
INSD:BP624731.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY081519.1,INSD:AY054628.1,INSD:BX823997.1,
INSD:BX824237.1"
/note="basic chitinase (HCHIB); FUNCTIONS IN: chitinase
activity; INVOLVED IN: response to cadmium ion, defense
response to fungus, jasmonic acid and ethylene-dependent
systemic resistance, ethylene mediated signaling pathway;
LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.06 six leaves
visible, LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Chitin-binding, type 1, conserved site
(InterPro:IPR018371), Glycoside hydrolase, family 19
(InterPro:IPR016283), Chitin-binding, type 1
(InterPro:IPR001002), Glycoside hydrolase, family 19,
catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana
protein match is: Chitinase family protein
(TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins
in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38;
Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes
- 131 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12500"
/db_xref="Araport:AT3G12500"
intron_pos 154:1 (1/1)
BEGIN
1 MPPQKENHRT LNKMKTNLFL FLIFSLLLSL SSAEQCGRQA GGALCPNGLC CSEFGWCGNT
61 EPYCKQPGCQ SQCTPGGTPP GPTGDLSGII SSSQFDDMLK HRNDAACPAR GFYTYNAFIT
121 AAKSFPGFGT TGDTATRKKE VAAFFGQTSH ETTGGWATAP DGPYSWGYCF KQEQNPASDY
181 CEPSATWPCA SGKRYYGRGP MQLSWNYNYG LCGRAIGVDL LNNPDLVAND AVIAFKAAIW
241 FWMTAQPPKP SCHAVIAGQW QPSDADRAAG RLPGYGVITN IINGGLECGR GQDGRVADRI
301 GFYQRYCNIF GVNPGGNLDC YNQRSFVNGL LEAAI
//