LOCUS AEE75167.1 209 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA binding protein protein.
ACCESSION CP002686-2184
PROTEIN_ID AEE75167.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G12210"
/inference="Similar to RNA sequence,
EST:INSD:EL160869.1,INSD:BP815516.1,INSD:ES099067.1,
INSD:DR259390.1,INSD:CF773361.1,INSD:BP825012.1,
INSD:ES189718.1,INSD:EL993348.1,INSD:DR259388.1,
INSD:EL036738.1,INSD:EL202573.1,INSD:EG512930.1,
INSD:DR259392.1,INSD:EL050304.1,INSD:DR259391.1,
INSD:EL306315.1,INSD:EL226950.1,INSD:BP653405.1,
INSD:DR259389.1,INSD:EH926317.1,INSD:CB265183.1,
INSD:DR374862.1,INSD:BP837696.1,INSD:EG513152.1,
INSD:EL273571.1,INSD:ES150312.1,INSD:BP653003.1,
INSD:EL296277.1,INSD:BP836606.1,INSD:ES133061.1,
INSD:ES108693.1,INSD:ES209684.1,INSD:EL226250.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY087120.1,INSD:BT014709.1"
/note="DNA binding; FUNCTIONS IN: DNA binding; INVOLVED
IN: DNA repair; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Helix-hairpin-helix DNA-binding motif, class 1
(InterPro:IPR003583); Has 226 Blast hits to 226 proteins
in 103 species: Archae - 3; Bacteria - 2; Metazoa - 90;
Fungi - 78; Plants - 41; Viruses - 0; Other Eukaryotes -
12 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12210"
/db_xref="Araport:AT3G12210"
intron_pos 75:2 (1/3)
intron_pos 141:0 (2/3)
intron_pos 170:0 (3/3)
BEGIN
1 MELEFKCSDV GVWKEALSSY DSRIESLNKP ELVSLDQFYR IKLPCLLHDR DPNPYLTTSE
61 LSQLMKWKLS RGKWRPRLLD FVSSLDDSVV KSASEKAFKS LPDISKAVKE LTVLKGVGAA
121 TASAVLAAYA PDIAPFMSDE AMEVALGNSK DYSLKQYLLF ATKLQDKAKE LKLKGEWDGP
181 SDIERALWSC TVRAKSQPEK SSSGKKRKR
//