LOCUS AEE75148.1 282 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tetraspanin6 protein.
ACCESSION CP002686-2159
PROTEIN_ID AEE75148.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TET6"
/locus_tag="AT3G12090"
/gene_synonym="tetraspanin6"
/inference="Similar to RNA sequence,
EST:INSD:EL049247.1,INSD:EL117699.1,INSD:AV824264.1,
INSD:W43278.1,INSD:CB263586.1,INSD:AA713077.1,
INSD:EL340382.1,INSD:CB263807.1,INSD:AA394775.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY090367.1"
/note="tetraspanin6 (TET6); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: aging; LOCATED
IN: endomembrane system, integral to membrane; EXPRESSED
IN: 8 plant structures; EXPRESSED DURING: LP.04 four
leaves visible, 4 anthesis, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin
(InterPro:IPR018499); BEST Arabidopsis thaliana protein
match is: tetraspanin5 (TAIR:AT4G23410.1); Has 433 Blast
hits to 431 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 4; Fungi - 0; Plants - 429; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12090"
/db_xref="Araport:AT3G12090"
intron_pos 165:0 (1/2)
intron_pos 270:2 (2/2)
BEGIN
1 MYRFSNTVIG VLNLLTLLAS IPIIGTALYK ARSSTTCENF LQTPLLVIGF IILIVSLAGF
61 IGACFNVAWA LWVYLVVMIF LIATLMGLTL FGLVVTSQGG GVEVPGRIYK EYRLGDYHPW
121 LRERVRDPEY WNSIRSCILS SKTCTKIESW TTLDYFQRDM TSVQSGCCKP PTACTYEAGV
181 VDGGGDCFRW NNGVEMLCYE CDACKAGVLE EIRLDWRKLS VVNILVLVLL IAVYAAGCCA
241 FHNTRHAAHP YHPSDDNRMT RVRPRWDYYW WRWWHEKKEQ LY
//