LOCUS AEE75146.1 663 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GTP-binding family protein protein.
ACCESSION CP002686-2157
PROTEIN_ID AEE75146.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="emb2738"
/locus_tag="AT3G12080"
/gene_synonym="embryo defective 2738"
/inference="Similar to RNA sequence,
EST:INSD:EL222129.1,INSD:BP618095.1,INSD:AA651351.1,
INSD:BP589196.1,INSD:AV536800.1,INSD:AV803837.1,
INSD:BP609816.1,INSD:BP819471.1,INSD:DR364286.1,
INSD:BP599860.1,INSD:ES054844.1,INSD:ES091853.1,
INSD:BP785775.1,INSD:AA728490.1,INSD:EH806946.1,
INSD:Z29821.1,INSD:EL240136.1,INSD:EL115133.1,
INSD:EH862035.1,INSD:EL080710.1,INSD:DR364285.1,
INSD:BP617927.1,INSD:ES187955.1,INSD:BP785829.1,
INSD:EL034052.1,INSD:EH900849.1,INSD:Z29822.1,
INSD:BP587797.1,INSD:BP636832.1,INSD:BP826965.1,
INSD:BP668541.1,INSD:BP650914.1,INSD:BX834538.1,
INSD:DR383683.1,INSD:BP642726.1,INSD:EL972555.1,
INSD:DR354013.1,INSD:BP789172.1,INSD:EH897666.1,
INSD:AV808201.1,INSD:BP639450.1,INSD:AV536212.1,
INSD:ES134196.1,INSD:EL193262.1,INSD:BP826170.1,
INSD:BP780967.1,INSD:AV534765.1,INSD:EH831072.1,
INSD:AV828994.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY080655.1,INSD:BX823189.1,INSD:BT046184.1"
/note="embryo defective 2738 (emb2738); FUNCTIONS IN: GTP
binding; INVOLVED IN: embryo development ending in seed
dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: GTP-binding, EngA (InterPro:IPR016484),
Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG
(InterPro:IPR006073), GTP-binding protein, HSR1-related
(InterPro:IPR002917); BEST Arabidopsis thaliana protein
match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has
46668 Blast hits to 25884 proteins in 2974 species: Archae
- 250; Bacteria - 36183; Metazoa - 387; Fungi - 453;
Plants - 421; Viruses - 0; Other Eukaryotes - 8974
(source: NCBI BLink)."
/db_xref="TAIR:AT3G12080"
/db_xref="Araport:AT3G12080"
intron_pos 130:1 (1/11)
intron_pos 150:0 (2/11)
intron_pos 181:0 (3/11)
intron_pos 279:0 (4/11)
intron_pos 325:2 (5/11)
intron_pos 355:0 (6/11)
intron_pos 418:0 (7/11)
intron_pos 472:0 (8/11)
intron_pos 536:2 (9/11)
intron_pos 587:0 (10/11)
intron_pos 643:1 (11/11)
BEGIN
1 MASLLDSLTT RGFFTMPSIS RIYSPLASST SLTSSPSSSS SIIPSLSVLS YTHQHPHSSR
61 FPFLVAATLD GSSAEEELDF EEFDQYAEDN FADDYSDDED DSIDISVLEK EARDIVRDYA
121 TTLSRELKIE DETIEGKETR RKGKRLAKNT QQIPEHLLQR VAIVGRPNVG KSALFNRLVG
181 ENRAIVVDEP GVTRDRLYGR SYWGDQEFVV VDTGGVMTVS KSPSGVMEEL NVSTTIGMEG
241 IPLSSREAAI ARMPSMIEKQ ATAAVDESAV IIFVVDGQAG PSGADVEIAD WLRKYYSHKY
301 IILAVNKCES PRKGLMQASE FWSLGFTPIP ISALSGTGTG ELLDLVCSGL IKLEIMENIE
361 EEEEENYIPA IAIIGRPNVG KSSILNALVR EDRTIVSPVS GTTRDAIDAE FTGPDGEKFR
421 LIDTAGIRKK SSVASSGSTT EAMSVNRAFR AIRRSDVVAL VIEAMACITE QDLKIAERIE
481 REGKGCLVVV NKWDTIPNKN QETAAHYEDD VREKLRSLKW APIVYSTAIT GHSVDNIVVA
541 AATVQKERSR RLSTAILNQV IREAVAFKSP PRTRGGKRGR VYYCTQAAIR PPTFVFFVND
601 AKLFSDTYRR YMEKQLRTDA GFAGTPIRLL WRSRKRSDKN GGGGGTMRMA GLTRQRNLAT
661 KRT
//