LOCUS AEE75144.1 317 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB geranylgeranyl transferase beta
subunit 2 protein.
ACCESSION CP002686-2154
PROTEIN_ID AEE75144.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RGTB2"
/locus_tag="AT3G12070"
/gene_synonym="AtRGTB2"
/gene_synonym="RAB geranylgeranyl transferase beta subunit
2"
/inference="Similar to RNA sequence,
EST:INSD:DR371770.1,INSD:EH827365.1,INSD:DR320737.1,
INSD:ES115386.1,INSD:ES063844.1,INSD:AV561037.1,
INSD:CB252928.1,INSD:DR320738.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084593.1,INSD:BT028896.1"
/note="RAB geranylgeranyl transferase beta subunit 2
(RGTB2); FUNCTIONS IN: catalytic activity; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein
prenyltransferase alpha-alpha toroid (InterPro:IPR008930),
Prenyltransferase/squalene oxidase (InterPro:IPR001330);
BEST Arabidopsis thaliana protein match is: RAB
geranylgeranyl transferase beta subunit 1
(TAIR:AT5G12210.1); Has 1529 Blast hits to 1352 proteins
in 256 species: Archae - 0; Bacteria - 31; Metazoa - 548;
Fungi - 456; Plants - 198; Viruses - 0; Other Eukaryotes -
296 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12070"
/db_xref="Araport:AT3G12070"
intron_pos 22:0 (1/8)
intron_pos 72:1 (2/8)
intron_pos 111:1 (3/8)
intron_pos 133:2 (4/8)
intron_pos 183:1 (5/8)
intron_pos 229:0 (6/8)
intron_pos 262:0 (7/8)
intron_pos 287:1 (8/8)
BEGIN
1 MADKLVAGKH LRYILNLMAE KKKESFESVV MDHLRMNGAY WGLTTLALLD KLGSVSEDEV
61 VSWVMTCQHE SGGFAGNTGH DPHVLYTLSA VQILALFDKL NILDVEKVSN YIAGLQNEDG
121 SFSGDIWGEV DTRFSYIAIC CLSILKCLDK INVKKAVDYI VSCKNLDGGF GCSPGAESHA
181 GQIFCCVGAL AITGNLHRVD KDLLGWWLCE RQDYESGGLN GRPEKLPDVC YSWWVLSSLI
241 MIDRVHWIEK AKLVKFILDS QDMDNGGISD RPSYTVDIFH TYFGVAGLSL LEYPGVKTID
301 PAYALPVHVI NRILFTK
//