LOCUS AEE75143.1 556 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana trichome birefringence-like protein
(DUF828) protein.
ACCESSION CP002686-2152
PROTEIN_ID AEE75143.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TBL1"
/locus_tag="AT3G12060"
/gene_synonym="TRICHOME BIREFRINGENCE-LIKE 1"
/inference="Similar to RNA sequence, EST:INSD:EH822097.1"
/inference="Similar to RNA sequence,
mRNA:INSD:DQ653077.1,INSD:DQ446655.1"
/note="TRICHOME BIREFRINGENCE-LIKE 1 (TBL1); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF231,
plant (InterPro:IPR004253); BEST Arabidopsis thaliana
protein match is: Plant protein of unknown function
(DUF828) (TAIR:AT5G06700.1); Has 1352 Blast hits to 1335
proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa
- 1; Fungi - 0; Plants - 1346; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="TAIR:AT3G12060"
/db_xref="Araport:AT3G12060"
intron_pos 250:2 (1/4)
intron_pos 315:0 (2/4)
intron_pos 379:2 (3/4)
intron_pos 432:2 (4/4)
BEGIN
1 MALDSVKHLP IHGVSAFSSV TVEIKSFFST VKPRKTSTFV YAFVVTFVAL TVFLAFSPSP
61 ITVALAPSIS SYVLPNITVS NSSNSSPSSL DSNFTTLRTP APENLTAVTK NLTFESPVAN
121 GTTDTNAKTI TIQFQTGHAK ENISCPDNKT ARDLDTHGAR KAPLSEVLAV NSTASPKRKQ
181 RRKSSLRKVI ESLKSCEFFE GDWVKDDSYP LYKPGSCNLI DEQFNCISNG RPDVDFQKLK
241 WKPKQCSLPR LNGGKLLEMI RGRRLVFVGD SLNRNMWESL VCILKGSVKD ESQVFEAHGR
301 HQFRWEAEYS FVFKDYNCTV EFFASPFLVQ EWEVTEKNGT KKETLRLDLV GKSSEQYKGA
361 DILVFNTGHW WTHEKTSKGE DYYQEGSTVH PKLDVDEAFR KALTTWGRWV DKNVNPKKSL
421 VFFRGYSPSH FSGGQWNAGG ACDDETEPIK NETYLTPYML KMEILERVLR GMKTPVTYLN
481 ITRLTDYRKD AHPSIYRKQK LSAEESKSPL LYQDCSHWCL PGVPDSWNEI FYAELLVKLD
541 QLGGKRRRKA LKDHRS
//