LOCUS AEE75107.2 456 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana E3 ubiquitin-protein ligase PUB24-
like protein protein.
ACCESSION CP002686-2097
PROTEIN_ID AEE75107.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PUB24"
/locus_tag="AT3G11840"
/gene_synonym="plant U-box 24"
/inference="Similar to RNA sequence,
EST:INSD:BP795198.1,INSD:BP857118.1,INSD:CD533052.1,
INSD:DR378767.1,INSD:BP641441.1,INSD:BP843509.1,
INSD:AU228517.1,INSD:BP859587.2,INSD:BP633908.1,
INSD:BP665607.1,INSD:BP857830.1,INSD:BP828818.2,
INSD:BP789302.1,INSD:DR279965.1,INSD:BP793203.1,
INSD:BP656610.1,INSD:AU237446.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823914.1,INSD:AY084238.1,INSD:AK228955.1"
/note="plant U-box 24 (PUB24); FUNCTIONS IN:
ubiquitin-protein ligase activity, binding; INVOLVED IN:
respiratory burst involved in defense response, protein
autoubiquitination, response to chitin, defense response;
LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 10 growth stages;
CONTAINS InterPro DOMAIN/s: U box domain
(InterPro:IPR003613), Armadillo-type fold
(InterPro:IPR016024); BEST Arabidopsis thaliana protein
match is: plant U-box 23 (TAIR:AT2G35930.1); Has 2348
Blast hits to 2308 proteins in 197 species: Archae - 0;
Bacteria - 24; Metazoa - 273; Fungi - 129; Plants - 1697;
Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink)."
/db_xref="TAIR:AT3G11840"
/db_xref="Araport:AT3G11840"
intron_pos 114:1 (1/1)
BEGIN
1 MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD
61 SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV VEEIKNLKKF GQEALGREET
121 LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP
181 SNDAKTILME NDRVMESLTW VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI
241 IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301 WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV
361 VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG TVEKLCSVLG MDCGLNLKEK
421 AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
//