LOCUS AEE75105.1 557 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TCP-1/cpn60 chaperonin family protein protein.
ACCESSION CP002686-2095
PROTEIN_ID AEE75105.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G11830"
/inference="Similar to RNA sequence,
EST:INSD:CB252378.1,INSD:DR366897.1,INSD:ES056470.1,
INSD:EL134396.1,INSD:ES146687.1,INSD:EH795864.1,
INSD:AV566840.1,INSD:BP665607.1,INSD:DR363213.1,
INSD:EH898622.1,INSD:EL178170.1,INSD:EL272120.1,
INSD:ES045364.1,INSD:AV565037.1,INSD:EL200069.1,
INSD:BP574919.1,INSD:CD533052.1,INSD:ES187825.1,
INSD:ES091632.1,INSD:EL969549.1,INSD:DR366896.1,
INSD:BE522897.1,INSD:BE525277.1,INSD:AV809280.1,
INSD:AV558243.1,INSD:AI995437.1,INSD:ES099060.1,
INSD:ES033679.1,INSD:BP578778.1,INSD:ES196990.1,
INSD:BP814697.1,INSD:ES166733.1,INSD:ES096804.1,
INSD:BE522896.1,INSD:AV795967.1,INSD:AV821142.1,
INSD:T04649.1,INSD:BP643801.1,INSD:CB254672.1,
INSD:DR359056.1,INSD:BP779826.1,INSD:EL279202.1,
INSD:AV789552.1,INSD:AV539597.1,INSD:CB261671.1,
INSD:BP787232.1,INSD:EL974434.1,INSD:EL309379.1,
INSD:BP641441.1,INSD:EL016109.1,INSD:AV560558.1,
INSD:AV817948.1,INSD:BP847873.1,INSD:EL275975.1,
INSD:EL027947.1,INSD:DR366895.1,INSD:BE529041.1,
INSD:EH902621.1,INSD:EL160854.1,INSD:BP656610.1,
INSD:EL977807.1,INSD:AV781411.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823339.1,INSD:AY070472.1"
/note="TCP-1/cpn60 chaperonin family protein; FUNCTIONS
IN: unfolded protein binding, ATP binding; INVOLVED IN:
response to cadmium ion; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone,
tailless complex polypeptide 1 (InterPro:IPR017998),
T-complex protein 1, eta subunit (InterPro:IPR012720),
Chaperonin TCP-1, conserved site (InterPro:IPR002194);
BEST Arabidopsis thaliana protein match is: T-complex
protein 1 alpha subunit (TAIR:AT3G20050.1); Has 19825
Blast hits to 19758 proteins in 3880 species: Archae -
808; Bacteria - 8913; Metazoa - 2158; Fungi - 1512; Plants
- 862; Viruses - 0; Other Eukaryotes - 5572 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G11830"
/db_xref="Araport:AT3G11830"
intron_pos 6:0 (1/13)
intron_pos 93:0 (2/13)
intron_pos 135:0 (3/13)
intron_pos 203:0 (4/13)
intron_pos 259:2 (5/13)
intron_pos 305:0 (6/13)
intron_pos 344:0 (7/13)
intron_pos 384:0 (8/13)
intron_pos 417:0 (9/13)
intron_pos 447:0 (10/13)
intron_pos 476:1 (11/13)
intron_pos 506:0 (12/13)
intron_pos 531:0 (13/13)
BEGIN
1 MASMMQPQII LLKEGTDTSQ GKAQLVSNIN ACTAVGDVVR TTLGPRGMDK LIHDDKGSVT
61 ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV VLLAAEFLKE AKPFIEDGVH
121 AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT
181 MVVDAVMAIG NDDRLNLIGI KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI
241 LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301 LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER
361 FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR RAVKNSTVVP GGGAIDMEIS
421 KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS
481 YGVDINTGGI ADSFANFVWE PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG
541 AMGRGRGGGR GRGMRRR
//