LOCUS AEE75095.1 200 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Polynucleotidyl transferase, ribonuclease
H-like superfamily protein protein.
ACCESSION CP002686-2085
PROTEIN_ID AEE75095.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G11770"
/inference="Similar to RNA sequence,
EST:INSD:ES057407.1,INSD:DR289698.1,INSD:DR289695.1,
INSD:EL041388.1,INSD:AV552194.1,INSD:BP857277.1,
INSD:AI997843.1,INSD:BP661646.1,INSD:DR289696.1,
INSD:AU236036.1,INSD:ES042134.1,INSD:DR289697.1,
INSD:Z38081.1,INSD:DR371452.1,INSD:AV536429.1,
INSD:AU226833.1,INSD:ES091000.1,INSD:BP867065.1,
INSD:Z46536.1,INSD:BP823603.1,INSD:BP643050.1,
INSD:ES119621.1,INSD:ES079942.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT003106.1,INSD:BX825761.1,INSD:AK228135.1"
/note="Polynucleotidyl transferase, ribonuclease H-like
superfamily protein; FUNCTIONS IN: 3'-5' exonuclease
activity, nucleic acid binding; INVOLVED IN: nucleobase,
nucleoside, nucleotide and nucleic acid metabolic process;
LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase,
ribonuclease H fold (InterPro:IPR012337), 3'-5'
exonuclease (InterPro:IPR002562); BEST Arabidopsis
thaliana protein match is: Polynucleotidyl transferase,
ribonuclease H-like superfamily protein
(TAIR:AT5G06450.1); Has 128 Blast hits to 128 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi
- 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink)."
/db_xref="TAIR:AT3G11770"
/db_xref="Araport:AT3G11770"
BEGIN
1 MASFDGQGFM MVDNSWVQTK AIDVESTTDI SPYLSKILED SVWNGNRSIV FDVYWDVKSV
61 STKSEWRLCS VKFSTKNFCL FLRLPNPFCD NLKDLYRFFA SKFVTFVGVQ IQEDLALLKE
121 NHGIVIRSSL EIGKLAAKAR GTPIVEFLGT RELAHKILWY DMSRLDSIQS KWDEASSNDR
181 LEAAAIEGWL IFNVYDQLQQ
//