LOCUS AEE75090.1 205 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ras-related small GTP-binding family
protein protein.
ACCESSION CP002686-2079
PROTEIN_ID AEE75090.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ATFP8"
/locus_tag="AT3G11730"
/gene_synonym="ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG D1"
/gene_synonym="ATRABD1"
/gene_synonym="RAB GTPASE HOMOLOG D1"
/gene_synonym="RABD1"
/inference="Similar to RNA sequence,
EST:INSD:ES054269.1,INSD:ES019166.1,INSD:BP864520.1,
INSD:DR354817.1,INSD:EH840962.1,INSD:EH982149.1,
INSD:EH925778.1,INSD:EL275853.1,INSD:EL133308.1,
INSD:EL174327.1,INSD:ES062397.1,INSD:EH843518.1,
INSD:ES213795.1,INSD:AI998260.1,INSD:ES068444.1,
INSD:ES184465.1,INSD:ES195171.1,INSD:EL997152.1,
INSD:EH806626.1,INSD:ES042750.1,INSD:EL331696.1,
INSD:EL063175.1,INSD:ES095811.1,INSD:CB260081.1,
INSD:ES178818.1,INSD:ES055784.1,INSD:EH943330.1,
INSD:EL159212.1,INSD:ES038580.1,INSD:ES170716.1,
INSD:EL998563.1,INSD:ES084475.1,INSD:ES078711.1,
INSD:AU239000.1,INSD:EL142870.1,INSD:BP850306.1,
INSD:EL970987.1,INSD:DR368096.1,INSD:EH814235.1,
INSD:EL294100.1,INSD:AU230262.1,INSD:ES128117.1,
INSD:ES197512.1,INSD:ES045733.1,INSD:DR368095.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK118150.1,INSD:BT005576.1,INSD:U64911.1,
INSD:BX825467.1"
/note="ATFP8; FUNCTIONS IN: GTP binding, myosin XI tail
binding, GTP-dependent protein binding; INVOLVED IN:
protein transport, small GTPase mediated signal
transduction; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Ras GTPase
(InterPro:IPR001806), Small GTP-binding protein
(InterPro:IPR005225), Small GTPase (InterPro:IPR020851),
Ras (InterPro:IPR013753), Ras small GTPase, Rab type
(InterPro:IPR003579); BEST Arabidopsis thaliana protein
match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has
29795 Blast hits to 29734 proteins in 779 species: Archae
- 25; Bacteria - 142; Metazoa - 15645; Fungi - 4180;
Plants - 3599; Viruses - 20; Other Eukaryotes - 6184
(source: NCBI BLink)."
/db_xref="TAIR:AT3G11730"
/db_xref="Araport:AT3G11730"
intron_pos 5:2 (1/7)
intron_pos 30:0 (2/7)
intron_pos 46:0 (3/7)
intron_pos 62:0 (4/7)
intron_pos 86:0 (5/7)
intron_pos 138:0 (6/7)
intron_pos 172:2 (7/7)
BEGIN
1 MSNEYDYLFK LLLIGDSSVG KSCLLLRFAD DAYIDSYIST IGVDFKIRTI EQDGKTIKLQ
61 IWDTAGQERF RTITSSYYRG AHGIIIVYDC TEMESFNNVK QWLSEIDRYA NESVCKLLIG
121 NKNDMVESKV VSTETGRALA DELGIPFLET SAKDSINVEQ AFLTIAGEIK KKMGSQTNAN
181 KTSGPGTVQM KGQPIQQNNG GCCGQ
//