LOCUS AEE75024.1 263 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Duplicated homeodomain-like superfamily
protein protein.
ACCESSION CP002686-1987
PROTEIN_ID AEE75024.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G11280"
/gene_synonym="MYB-LIKE PROTEIN"
/gene_synonym="TF2"
/inference="Similar to RNA sequence,
EST:INSD:BP628751.1,INSD:AV541243.1,INSD:BP602384.1,
INSD:BP607633.1,INSD:BP844031.1,INSD:DR289035.1,
INSD:DN604637.1,INSD:EG521740.1,INSD:EH808738.1,
INSD:CA781535.1,INSD:BP583823.1,INSD:DR289032.1,
INSD:AV539005.1,INSD:AV551344.1,INSD:BP798161.1,
INSD:BP843673.1,INSD:AV544341.1,INSD:EL298329.1,
INSD:EH948606.1,INSD:T21489.1,INSD:BP584089.1,
INSD:BP625218.1,INSD:EL093643.1,INSD:EH898890.1,
INSD:DR289038.1,INSD:EL184414.1,INSD:BP800970.1,
INSD:DR289033.1,INSD:EG521735.1,INSD:EL289834.1,
INSD:EH981398.1,INSD:EG521755.1,INSD:BP859915.1,
INSD:ES081326.1,INSD:AV794167.1,INSD:EG521742.1,
INSD:BP866231.1,INSD:AV817125.1,INSD:DR289034.1,
INSD:BP852898.1,INSD:EG521737.1,INSD:BP666788.1,
INSD:EH976503.1,INSD:DR379390.1,INSD:EG521758.1,
INSD:AV551656.1,INSD:EL316912.1,INSD:BP641255.1,
INSD:EL112350.1,INSD:BP828712.1,INSD:AV551345.1,
INSD:EG521754.1,INSD:EH973965.1,INSD:DR289036.1,
INSD:EH989610.1,INSD:EL144807.1,INSD:CB259201.1,
INSD:AV524985.1,INSD:DR289037.1,INSD:BP790374.1,
INSD:EL337205.1,INSD:EG521759.1,INSD:BP668101.1,
INSD:EH964074.1,INSD:EH852108.1,INSD:ES083645.1,
INSD:EH919928.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY091265.1,INSD:AY084487.1,INSD:AY550308.1"
/note="Duplicated homeodomain-like superfamily protein;
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat
shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT,
eukarya (InterPro:IPR017884), Myb-like DNA-binding domain,
SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding
(InterPro:IPR001005), Myb, DNA-binding
(InterPro:IPR014778), Homeodomain-like
(InterPro:IPR009057), HTH transcriptional regulator,
Myb-type, DNA-binding (InterPro:IPR017930); BEST
Arabidopsis thaliana protein match is: Duplicated
homeodomain-like superfamily protein (TAIR:AT5G05790.1);
Has 1712 Blast hits to 1708 proteins in 167 species:
Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants
- 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G11280"
/db_xref="Araport:AT3G11280"
intron_pos 135:2 (1/1)
BEGIN
1 METLHPFSHL PISDHRFVVQ EMVSLHSSSS GSWTKEENKM FERALAIYAE DSPDRWFKVA
61 SMIPGKTVFD VMKQYSKLEE DVFDIEAGRV PIPGYPAASS PLGFDTDMCR KRPSGARGSD
121 QDRKKGVPWT EEEHRRFLLG LLKYGKGDWR NISRNFVVSK TPTQVASHAQ KYYQRQLSGA
181 KDKRRPSIHD ITTGNLLNAN LNRSFSDHRD ILPDLGFIDK DDTEEGVIFM GQNLSSENLF
241 SPSPTSFEAA INFAGENVFS AGA
//