LOCUS AEE75020.1 323 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L10 family protein protein.
ACCESSION CP002686-1983
PROTEIN_ID AEE75020.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G11250"
/inference="Similar to RNA sequence,
EST:INSD:EL249595.1,INSD:ES171782.1,INSD:ES060679.1,
INSD:ES205164.1,INSD:AV561267.1,INSD:BP785468.1,
INSD:EL991131.1,INSD:ES039631.1,INSD:ES067131.1,
INSD:EL222124.1,INSD:ES101855.1,INSD:ES105694.1,
INSD:EL187221.1,INSD:ES147021.1,INSD:ES158666.1,
INSD:EL998920.1,INSD:DR346649.1,INSD:ES151934.1,
INSD:BP633627.1,INSD:ES111294.1,INSD:ES166598.1,
INSD:DR346646.1,INSD:EH975461.1,INSD:DR346653.1,
INSD:BP827942.1,INSD:EL228615.1,INSD:AV557702.1,
INSD:DR346652.1,INSD:BP840273.1,INSD:EH897226.1,
INSD:ES010815.1,INSD:EH854336.1,INSD:BP644322.1,
INSD:ES041576.1,INSD:ES178199.1,INSD:EL176134.1,
INSD:ES150321.1,INSD:AV522016.1,INSD:ES198164.1,
INSD:ES052611.1,INSD:EL175386.1,INSD:EH963453.1,
INSD:EL051784.1,INSD:EL980293.1,INSD:ES122452.1,
INSD:DR346645.1,INSD:ES030227.1,INSD:AV535813.1,
INSD:AV826380.1,INSD:EL230850.1,INSD:DR346657.1,
INSD:EL310125.1,INSD:AV561782.1,INSD:BU635633.1,
INSD:AV550741.1,INSD:AV555368.1,INSD:DR346655.1,
INSD:ES007712.1,INSD:DR346654.1,INSD:ES204581.1,
INSD:ES052790.1,INSD:DR346650.1,INSD:DR346656.1,
INSD:ES131727.1,INSD:ES036449.1,INSD:BP867708.1,
INSD:ES051267.1,INSD:AV538459.1,INSD:ES180781.1,
INSD:AV558707.1,INSD:ES144469.1,INSD:DR346648.1,
INSD:EL319249.1,INSD:ES051270.1,INSD:ES195226.1,
INSD:EL340202.1,INSD:EL995045.1,INSD:DR346647.1,
INSD:EL032898.1,INSD:AI996983.1,INSD:ES092174.1,
INSD:ES172535.1,INSD:EH908635.1,INSD:EL024865.1,
INSD:EL025935.1,INSD:EL190444.1,INSD:ES090135.1,
INSD:AV794646.1,INSD:EH982797.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY091201.1,INSD:AY087728.1,INSD:AY056150.1"
/note="Ribosomal protein L10 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation, response to salt stress,
translation; LOCATED IN: cytosolic ribosome, ribosome,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ribosomal protein 60S (InterPro:IPR001813), Ribosomal
protein L10 (InterPro:IPR001790); BEST Arabidopsis
thaliana protein match is: Ribosomal protein L10 family
protein (TAIR:AT3G09200.1); Has 1983 Blast hits to 1980
proteins in 500 species: Archae - 322; Bacteria - 1;
Metazoa - 680; Fungi - 420; Plants - 226; Viruses - 0;
Other Eukaryotes - 334 (source: NCBI BLink)."
/db_xref="TAIR:AT3G11250"
/db_xref="Araport:AT3G11250"
intron_pos 86:0 (1/4)
intron_pos 109:0 (2/4)
intron_pos 142:0 (3/4)
intron_pos 273:0 (4/4)
BEGIN
1 MVKATKAEKK IAYDTKLCQL IDEYTQILVV AADNVGSTQL QNIRKGLRGD SVVLMGKNTM
61 MKRSVRIHSE NSGNTAILNL LPLLQGNVGL IFTKGDLKEV SEEVAKYKVG APARVGLVAP
121 IDVVVQPGNT GLDPSQTSFF QVLNIPTKIN KGTVEIITPV ELIKQGDKVG SSEAALLAKL
181 GIRPFSYGLV VQSVYDNGSV FSPEVLDLTE DQLVEKFASG ISMVTSLALA VSYPTLAAAP
241 HMFINAYKNA LAIAVATDYT FPQAEKVKEF LKDPSKFVVA AAAVSADAGG GSAQAGAAAK
301 VEEKKEESDE EDYEGGFGLF DEE
//