LOCUS AEE74977.1 231 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana manganese superoxide dismutase 1 protein.
ACCESSION CP002686-1924
PROTEIN_ID AEE74977.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="MSD1"
/locus_tag="AT3G10920"
/gene_synonym="ARABIDOPSIS MANGANESE SUPEROXIDE DISMUTASE
1"
/gene_synonym="ATMSD1"
/gene_synonym="AtSOD1"
/gene_synonym="manganese superoxide dismutase 1"
/gene_synonym="MANGANESE SUPEROXIDE DISMUTASE 1"
/gene_synonym="MATERNAL EFFECT EMBRYO ARREST 33"
/gene_synonym="MEE33"
/gene_synonym="superoxide dismutase 1"
/inference="Similar to RNA sequence,
EST:INSD:EH897576.1,INSD:DR243997.1,INSD:EH923733.1,
INSD:BP581293.1,INSD:DR243970.1,INSD:BP592398.1,
INSD:ES100773.1,INSD:EL169074.1,INSD:BP652701.1,
INSD:DR243981.1,INSD:EH894268.1,INSD:BP626508.1,
INSD:DR243984.1,INSD:ES071099.1,INSD:EG469211.1,
INSD:BP603973.1,INSD:BP647585.1,INSD:EL984350.1,
INSD:DR243968.1,INSD:BP867760.1,INSD:EL178286.1,
INSD:BP864398.1,INSD:EL261012.1,INSD:DR243972.1,
INSD:BP851991.1,INSD:DR244003.1,INSD:DR244021.1,
INSD:EL337081.1,INSD:DR243998.1,INSD:EL158329.1,
INSD:DR244019.1,INSD:AV786627.1,INSD:BP825996.2,
INSD:EH912829.1,INSD:DR243971.1,INSD:EL094222.1,
INSD:EL273408.1,INSD:DR244004.1,INSD:DR244020.1,
INSD:ES016842.1,INSD:EL146087.1,INSD:T20828.1,
INSD:DR244006.1,INSD:DR244008.1,INSD:DR243980.1,
INSD:EL268000.1,INSD:DR243975.1,INSD:EL270983.1,
INSD:EH967658.1,INSD:DR230632.1,INSD:ES204287.1,
INSD:AV807043.1,INSD:EL019702.1,INSD:EL340270.1,
INSD:DR244014.1,INSD:EL973583.1,INSD:CB263912.1,
INSD:H76961.1,INSD:ES032128.1,INSD:BP787933.1,
INSD:EL053144.1,INSD:BU635875.1,INSD:AV822989.1,
INSD:ES133440.1,INSD:EH803528.1,INSD:EH795971.1,
INSD:BP669433.1,INSD:EH875519.1,INSD:EL192146.1,
INSD:ES002709.1,INSD:ES067562.1,INSD:EL238963.1,
INSD:CK117691.1,INSD:ES016958.1,INSD:EH934875.1,
INSD:AV798465.1,INSD:T44258.1,INSD:CD530163.1,
INSD:T41917.1,INSD:BP577997.1,INSD:EL269697.1,
INSD:DR243976.1,INSD:DR244016.1,INSD:DR244026.1,
INSD:EL031237.1,INSD:ES111046.1,INSD:EL288118.1,
INSD:EG497715.1,INSD:DR243999.1,INSD:BP621812.1,
INSD:EL297253.1,INSD:DR243985.1,INSD:BP633093.1,
INSD:DR243983.1,INSD:EH811655.1,INSD:AV804756.1,
INSD:BP597184.1,INSD:DR244027.1,INSD:DR243990.1,
INSD:DR244002.1,INSD:EL277164.1,INSD:DR243992.1,
INSD:ES133944.1,INSD:BP632274.1,INSD:BP787919.1,
INSD:DR244017.1,INSD:DR243986.1,INSD:BP590127.1,
INSD:ES013341.1,INSD:ES027784.1,INSD:ES215712.1,
INSD:DR244012.1,INSD:BP574853.1,INSD:DR244023.1,
INSD:DR244030.1,INSD:DR243987.1,INSD:DR243989.1,
INSD:DR243988.1,INSD:CB263996.1,INSD:ES030650.1,
INSD:DR243973.1,INSD:DR244013.1,INSD:ES002376.1,
INSD:ES132672.1,INSD:EH801697.1,INSD:BP815511.1,
INSD:BP634651.1,INSD:EL036303.1,INSD:BP821969.1,
INSD:AV783874.1,INSD:EH884341.1,INSD:BP857126.1,
INSD:CB262417.1,INSD:DR244009.1,INSD:DR244022.1,
INSD:DR244028.1,INSD:DR243978.1,INSD:BP622715.1,
INSD:EL313748.1,INSD:BP563600.1,INSD:EH985112.1,
INSD:EL239822.1,INSD:ES137800.1,INSD:EH956095.1,
INSD:DR243979.1,INSD:BP628019.1,INSD:DR244018.1,
INSD:DR243994.1,INSD:BP633843.1,INSD:DR243967.1,
INSD:CD532986.1,INSD:DR243969.1,INSD:EL994728.1,
INSD:DR243995.1,INSD:ES023612.1,INSD:DR243977.1,
INSD:BP636736.1,INSD:ES201136.1,INSD:BP633602.1,
INSD:BP566088.1,INSD:DR244010.1,INSD:BP590656.1,
INSD:AV553707.1,INSD:EL128985.1,INSD:AI994479.1,
INSD:ES047230.1,INSD:EH974686.1,INSD:BP630588.1,
INSD:BP574111.1,INSD:CF653052.1,INSD:BP580968.1,
INSD:ES006049.1,INSD:EH966243.1,INSD:EH847513.1,
INSD:EH813123.1,INSD:EL177413.1,INSD:BP868688.1,
INSD:ES212883.1,INSD:DR244011.1,INSD:BP833867.1,
INSD:BE527753.1,INSD:DR243982.1,INSD:DR243996.1,
INSD:EL991995.1,INSD:ES011267.1,INSD:ES127584.1,
INSD:DR243991.1,INSD:DR244025.1,INSD:ES084623.1,
INSD:DR244001.1,INSD:CB263963.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY085319.1,INSD:AF061518.1,INSD:AY072495.1,
INSD:AK220683.1,INSD:AY059807.1,INSD:BX824797.1"
/note="manganese superoxide dismutase 1 (MSD1); FUNCTIONS
IN: superoxide dismutase activity, copper ion binding,
metal ion binding; INVOLVED IN: response to zinc ion,
response to salt stress, defense response to bacterium,
removal of superoxide radicals, embryo development ending
in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide
dismutase, N-terminal (InterPro:IPR019831), Manganese/iron
superoxide dismutase (InterPro:IPR001189), Manganese/iron
superoxide dismutase, C-terminal (InterPro:IPR019832),
Manganese/iron superoxide dismutase, binding site
(InterPro:IPR019833); BEST Arabidopsis thaliana protein
match is: Iron/manganese superoxide dismutase family
protein (TAIR:AT3G56350.1); Has 11404 Blast hits to 11403
proteins in 3385 species: Archae - 194; Bacteria - 8096;
Metazoa - 447; Fungi - 710; Plants - 427; Viruses - 1;
Other Eukaryotes - 1529 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10920"
/db_xref="Araport:AT3G10920"
intron_pos 99:1 (1/5)
intron_pos 115:0 (2/5)
intron_pos 157:0 (3/5)
intron_pos 176:0 (4/5)
intron_pos 202:0 (5/5)
BEGIN
1 MAIRCVASRK TLAGLKETSS RLLRIRGIQT FTLPDLPYDY GALEPAISGE IMQIHHQKHH
61 QAYVTNYNNA LEQLDQAVNK GDASTVVKLQ SAIKFNGGGH VNHSIFWKNL APSSEGGGEP
121 PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT
181 KGGSLVPLVG IDVWEHAYYL QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
//