LOCUS AEE74957.1 496 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002686-1897
PROTEIN_ID AEE74957.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G10810"
/inference="Similar to RNA sequence,
EST:INSD:EL323136.1,INSD:ES067374.1,INSD:ES036877.1,
INSD:EH857982.1,INSD:ES016177.1,INSD:ES198929.1,
INSD:EL335773.1,INSD:EH911945.1,INSD:EL170296.1,
INSD:ES059286.1,INSD:EL055367.1,INSD:EL307498.1,
INSD:EH894958.1,INSD:CB257587.1,INSD:EH899103.1,
INSD:ES155906.1,INSD:EL271974.1,INSD:EL075618.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT030460.1"
/note="zinc finger (C3HC4-type RING finger) family
protein; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G56590.1); Has 18036 Blast hits to 9011 proteins
in 812 species: Archae - 58; Bacteria - 3529; Metazoa -
8497; Fungi - 1587; Plants - 1132; Viruses - 68; Other
Eukaryotes - 3165 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10810"
/db_xref="Araport:AT3G10810"
intron_pos 78:1 (1/4)
intron_pos 116:0 (2/4)
intron_pos 240:0 (3/4)
intron_pos 473:1 (4/4)
BEGIN
1 MGKTEDDVSL RVAGGEATGD STVRNARCGC CKWISSFVGF KCLFVLLLSV ALFLSALFLL
61 LPFPMDREDS NLDPRFRGHA IVASFSINRS ASFLNENTLQ LQNDIFQEMS YISIKVTILA
121 VEPSDELNIT KVVFGIDPDT GYREILPLSL SSIKEMFESV LINQSTLQLT KSLFGETFLF
181 EVLKFPGGIT VIPPQSAFPL QKFKIVFNFT LNYSIHQIQI NFNTLASQLK NGLNLAPYEN
241 LYVSLSNSEG STVSPPTTVH SSVLLRVGTS NSSPRLKQLT DTITGSRSKN LGLNNTIFGK
301 VKQVRLSSFL PNSSDSSTKS PSPSPSPHSK HHHHHHHHHH HHHHHHHNHH HHHHHNLSPK
361 MAPEVSPVAS PAPHRSRKRA PSAPPPCNPG NRVHFKEKRV QFSSTPAPAP SAGAPHHQLH
421 SPAPISAAKS HIVPISAPLP HVVFAHAAQP PITEPREPHA NEVAHPQPQS SSSAIEVLPA
481 MPWIVLLMLI VAWLHE
//