LOCUS AEE74943.1 950 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA GYRASE A protein.
ACCESSION CP002686-1877
PROTEIN_ID AEE74943.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="GYRA"
/locus_tag="AT3G10690"
/gene_synonym="DNA GYRASE A"
/gene_synonym="T7M13.23"
/inference="Similar to RNA sequence,
EST:INSD:AV782145.1,INSD:BP628585.1,INSD:ES133489.1,
INSD:EL052985.1,INSD:ES082736.1,INSD:AV567672.1,
INSD:ES099176.1,INSD:EL198875.1,INSD:ES197745.1,
INSD:AI995400.1,INSD:EH917747.1,INSD:ES057146.1,
INSD:EG485376.1,INSD:ES168712.1,INSD:AV546063.1,
INSD:EH952095.1,INSD:EL160939.1,INSD:EH941689.1,
INSD:ES157794.1,INSD:EH925290.1,INSD:EL007575.1,
INSD:EL197741.1,INSD:BE525773.1,INSD:AV529478.1,
INSD:EH891909.1,INSD:AV547612.1,INSD:ES123777.1"
/note="DNA GYRASE A (GYRA); FUNCTIONS IN: DNA
topoisomerase activity, catalytic activity, ATP binding;
INVOLVED IN: DNA topological change, DNA metabolic
process; LOCATED IN: mitochondrion, chloroplast, nucleoid;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase,
subunit A (InterPro:IPR005743), DNA topoisomerase, type
IIA, subunit A/C-terminal (InterPro:IPR002205), DNA
topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
(InterPro:IPR013758), DNA topoisomerase, type IIA, subunit
A, alpha-helical (InterPro:IPR013757), DNA topoisomerase,
type IIA, central (InterPro:IPR013760), DNA
gyrase/topoisomerase IV, subunit A, C-terminal
beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis
thaliana protein match is: topoisomerase II
(TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins
in 3265 species: Archae - 84; Bacteria - 12907; Metazoa -
182; Fungi - 204; Plants - 111; Viruses - 99; Other
Eukaryotes - 8766 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10690"
/db_xref="Araport:AT3G10690"
intron_pos 142:2 (1/26)
intron_pos 166:0 (2/26)
intron_pos 188:0 (3/26)
intron_pos 222:0 (4/26)
intron_pos 237:0 (5/26)
intron_pos 270:0 (6/26)
intron_pos 299:0 (7/26)
intron_pos 322:2 (8/26)
intron_pos 359:0 (9/26)
intron_pos 380:0 (10/26)
intron_pos 402:0 (11/26)
intron_pos 431:2 (12/26)
intron_pos 448:0 (13/26)
intron_pos 477:0 (14/26)
intron_pos 508:1 (15/26)
intron_pos 532:0 (16/26)
intron_pos 562:0 (17/26)
intron_pos 604:0 (18/26)
intron_pos 656:2 (19/26)
intron_pos 684:0 (20/26)
intron_pos 739:0 (21/26)
intron_pos 773:0 (22/26)
intron_pos 818:2 (23/26)
intron_pos 858:0 (24/26)
intron_pos 876:1 (25/26)
intron_pos 909:2 (26/26)
BEGIN
1 MTPVLCHSTA SIPNPNSLMS LSSTLRLSSS LLRRSFFRFP LTDPLCRLRR TEPSATRFFS
61 SRTPRSGKFV VGAGKRGDEQ VKEESGANNG GLVVSGDESR IVPFELHKEA TESYMSYALS
121 VLLGRALPDV RDGLKPVHRR ILFAMHELGM SSKKPYKKCA RVVGEVLGKF HPHGDTAVYD
181 SLVRMAQSFS LRCPLIQGHG NFGSIDADPP AAMRYTECRL DPLAEAVLLS DLDQDTVDFV
241 ANFDNSQKEP AVLPARLPAL LLNGASGIAV GMATNIPPHN LGELVDVLCA LIHNPEATLQ
301 ELLEYMPAPD FPTGGIIMGN LGVLDAYRTG RGRVVVRGKA EVELLDPKTK RNAVIITEIP
361 YQTNKATLVQ KIAELVENKT LEGISDIRDE SDRNGMRVVI ELKRGGDPAL VLNNLYRHTA
421 LQSSFSCNMV GICDGEPKLM GLKELLQAFI DFRCSVVERR ARFKLSHAQQ RKHIIEGIVV
481 GLDNVDEVIE LITKASSHSS ATAALQSEYG LSEKQAEAIL EITLRRLTAL ERKKFTDESS
541 SLTEQITKLE QLLSTRTNIL KLIEQEAIEL KDRFSSPRRS MLEDSDSGDL EDIDVIPNEE
601 MLMAVSEKGY VKRMKADTFN LQHRGTIGKS VGKLRVDDAM SDFLVCHAHD HVLFFSDRGI
661 VYSTRAYKIP ECSRNAAGTP LVQILSMSEG ERVTSIVPVS EFAEDRYLLM LTVNGCIKKV
721 SLKLFSGIRS TGIIAIQLNS GDELKWVRCC SSDDLVAMAS QNGMVALSTC DGVRTLSRNT
781 KGVTAMRLKN EDKIASMDII PASLRKDMEE KSEDASLVKQ STGPWLLFVC ENGYGKRVPL
841 SSFRRSRLNR VGLSGYKFAE DDRLAAVFVV GYSLAEDGES DEQVVLVSQS GTVNRIKVRD
901 ISIQSRRARG VILMRLDHAG KIQSASLISA ADEEETEGTL SNEAVEAVSL
//