LOCUS AEE74937.1 235 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNF7 family protein protein.
ACCESSION CP002686-1869
PROTEIN_ID AEE74937.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="VPS60.1"
/locus_tag="AT3G10640"
/inference="Similar to RNA sequence,
EST:INSD:DR259219.1,INSD:BP634263.1,INSD:AV527695.1,
INSD:EL021896.1,INSD:BP799181.1,INSD:AU226928.1,
INSD:BP842933.1,INSD:T04390.1,INSD:ES148508.1,
INSD:AV536479.1,INSD:EH976996.1,INSD:EL213627.1,
INSD:CF652016.1,INSD:EL074491.1,INSD:EL046065.1,
INSD:EL165323.1,INSD:ES018166.1,INSD:BP573996.1,
INSD:BP849439.2,INSD:AU236112.1,INSD:DR259220.1,
INSD:EH941614.1,INSD:EH909514.1,INSD:H37646.1,
INSD:AV540647.1,INSD:BP608762.1,INSD:ES126444.1,
INSD:EH811820.1,INSD:EL319778.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ276741.1,INSD:BT005859.1,INSD:AK228223.1"
/note="VPS60.1; CONTAINS InterPro DOMAIN/s: Snf7
(InterPro:IPR005024); BEST Arabidopsis thaliana protein
match is: SNF7 family protein (TAIR:AT5G04850.1); Has 1147
Blast hits to 1145 proteins in 230 species: Archae - 3;
Bacteria - 8; Metazoa - 447; Fungi - 307; Plants - 230;
Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10640"
/db_xref="Araport:AT3G10640"
intron_pos 24:0 (1/6)
intron_pos 74:2 (2/6)
intron_pos 106:0 (3/6)
intron_pos 130:0 (4/6)
intron_pos 167:1 (5/6)
intron_pos 219:0 (6/6)
BEGIN
1 MRRVFGAKKN TEPPPSIQDA SDRINKRGDS VEDKIKKLDV ELCKYKEQLK KTRPGPAQEA
61 VKARAMRVLK QKKMYEGQRD MLYNQTFNLD QVSFAAEGLK DAQQTMTALK SANKELKGMM
121 KTVKIQDIDN LQDEMMDLMD VSSEIQESLG RSYNIPDGLD EDDLMGELDA LEADMGNETE
181 ADGMPSYLQP DTETDYDSEL NLPAAPTGHN GAPHGRAQAE DEFGLPAVPR ASLRG
//