LOCUS AEE74903.1 684 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002686-1823
PROTEIN_ID AEE74903.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SPD1"
/locus_tag="AT3G10420"
/gene_synonym="SEEDLING PLASTID DEVELOPMENT 1"
/inference="Similar to RNA sequence,
EST:INSD:EL240003.1,INSD:BP591226.1,INSD:EL990940.1,
INSD:EG508157.1,INSD:DR383273.1,INSD:CD531344.1,
INSD:EL123915.1,INSD:EG508155.1,INSD:AV821439.1,
INSD:EL063621.1,INSD:CD529032.1,INSD:AV798352.1,
INSD:EL215795.1,INSD:BP629171.1,INSD:BP602035.1,
INSD:AV442274.1,INSD:EG528397.1,INSD:EG505538.1,
INSD:T75882.1,INSD:CD534278.1,INSD:AV524825.1,
INSD:EL970482.1,INSD:AV815663.1,INSD:CD531160.1,
INSD:CD532399.1,INSD:T76350.1,INSD:AV521783.1,
INSD:CD530591.1,INSD:EG528396.1,INSD:EG529453.1,
INSD:BP562358.2,INSD:BE527132.1,INSD:DR259641.1,
INSD:EH928823.1,INSD:EH994182.1,INSD:AV440629.1,
INSD:EL171013.1,INSD:EG508168.1,INSD:EG508156.1,
INSD:EH882199.1,INSD:AV564240.1,INSD:AA404914.1,
INSD:EH801788.1,INSD:CB256145.1,INSD:AA395240.1,
INSD:BP781474.1,INSD:CB185665.1,INSD:AV797858.1,
INSD:BP598258.1,INSD:BP595803.1,INSD:AV831265.1,
INSD:AI100729.1,INSD:CD532862.1,INSD:EH913506.1,
INSD:EG471668.1,INSD:EG505536.1,INSD:BP587794.1,
INSD:BP611090.1,INSD:EH948916.1,INSD:AA394529.1,
INSD:CK121822.1,INSD:ES184157.1,INSD:AV533563.1,
INSD:AV816125.1,INSD:DR361401.1,INSD:EG506435.1,
INSD:T42752.1,INSD:CD533075.1,INSD:AI993346.1,
INSD:AV788029.1,INSD:AV819100.1,INSD:BP591759.1,
INSD:AI993327.1,INSD:EL164093.1,INSD:CD530074.1,
INSD:EH803492.1,INSD:DR259639.1,INSD:T04637.1,
INSD:EL031665.1,INSD:BP599554.1,INSD:EL111194.1,
INSD:AV807557.1,INSD:ES138971.1,INSD:EL046870.1,
INSD:EH931041.1,INSD:AV565545.1,INSD:T43903.1,
INSD:BP599198.1,INSD:T75878.1,INSD:AV814642.1,
INSD:BP595354.1,INSD:CD531129.1,INSD:BP614520.1,
INSD:EL108397.1,INSD:CA781405.1,INSD:BP807729.1,
INSD:CD532863.1,INSD:BP783249.1,INSD:AV781891.1,
INSD:BP592039.1,INSD:EL107677.1,INSD:EL130525.1,
INSD:DR259640.1,INSD:EG421016.1,INSD:EG506433.1,
INSD:BP585603.1,INSD:CB256138.1,INSD:ES077696.1,
INSD:EG508169.1,INSD:EH853185.1,INSD:EL070583.1,
INSD:EL279959.1,INSD:ES215626.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY056103.1,INSD:BT004529.1,INSD:BX825880.1,
INSD:BX823284.1,INSD:BX823666.1"
/note="P-loop containing nucleoside triphosphate
hydrolases superfamily protein; FUNCTIONS IN:
nucleoside-triphosphatase activity, nucleotide binding;
LOCATED IN: chloroplast; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: ATPase, AAA+ type, core
(InterPro:IPR003593); BEST Arabidopsis thaliana protein
match is: P-loop containing nucleoside triphosphate
hydrolases superfamily protein (TAIR:AT1G73170.1); Has
1500 Blast hits to 1489 proteins in 625 species: Archae -
20; Bacteria - 1170; Metazoa - 12; Fungi - 5; Plants -
122; Viruses - 0; Other Eukaryotes - 171 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G10420"
/db_xref="Araport:AT3G10420"
intron_pos 160:0 (1/8)
intron_pos 231:2 (2/8)
intron_pos 282:0 (3/8)
intron_pos 346:0 (4/8)
intron_pos 400:1 (5/8)
intron_pos 482:0 (6/8)
intron_pos 541:0 (7/8)
intron_pos 596:0 (8/8)
BEGIN
1 MRALNSRLVL IDINSSWQAS RRLISATATA FSSDSSSSFR RTRGARQRIA SSKSPASSPS
61 PVRRPSDGFS FDVRSPSSDS SISSRKSPTT APPTVELDAF LEILPPATRK ELVKHEAIEE
121 LIEVVMDLGR KPLARFPSGD WVISEQPVTH QDLELAVSKV GDFSDDNRSG IDRSLHRISA
181 IRNRKLQVIG LTCRVGRVVS GSAEIIRDLI EGGGSILVIG SPGVGKTTLI REIARMLADE
241 HRKRVVIVDT SNEIGGDGDV PHSGIGRARR MQVPNVNLQH DVMIEAVENH MPETIIIDEI
301 GTELEALAAS TIAQRGVQLV ATAHGMTIDN IIKNPSLQIL IGGIESVTLG DEEARKRKVQ
361 KTILERKGPP TFTCAVEMIS RTECRVHQRL DVTVDAILAG KSAPFEIRQI RGEDDVPHKL
421 VTPIPLENLE EEPAPLLNRD FVSELLSDDE DEDFLLIRSN KARSNTYTSP RSSPVHVYTY
481 NVLEADLLQV AEVMGLDDEI EVTDDVGEAD VILASSSELK QNSSIRRVAK LHKLPIFVIK
541 STTMAQMVKA VRMILGRESF GSAPKAIEKS SVDDIEIKDD APESKPSLEE LDALEEVRLA
601 IEYIVIPGGE PVELLPRRSD IIVRQLELVE SYQLAVENLG THLNPRLQIL PRRSTKKTLT
661 SSSPQKSADG SMGTTGTRLP FLKD
//